| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1548 |
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| Symbol | |
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| ID | 6176011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1723840 |
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| End bp | 1724586 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681309 |
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| Product | Pili assembly chaperone, N-terminal |
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| Protein accession | YP_001808251 |
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| Protein GI | 172060599 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0264488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.907271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCTG TTTTCTCCCT TTCCTTCGCG CGCCGCGCGG CATGCATGCT GACCGTGGCC
AGCGCGCTGC TCGCCGGCGT CGCGCACGCG GCGATCGTGC CGGACCGCAC GCGCGTGATC
TTCAACGAAG GCGAACCGGC CGCGATCGTC ACGATCACCA ACAAGAGCAC GACGTATCCG
TATCTCGTGC AGTCGTGGCT CGAGGACACG CGCGGCAACA AGATCACGTC GCCGCTGATG
GTCGTGCCGC CGCTGCAGCG CGTCGAGGCG AACGAGCGCA ACGTGCTGCG CATCGCGAAG
CTGCCCGGCG CCGCGCTGCC GGCCGATCGC GAATCGGTGT TCTATCTGAA CATCCGCGAA
GTGCCGCCGA AGACCGATAC GCCGAACACG CTGCAGATCG CGCTGCATAC GCAGATGAAG
CTGTTCTACC GGCCGAAGGG CGTGCAGCCG CCACGTGACG AGGACTGGAC GCTGCCGATG
ACGCTGCGCG TCGACGCGGC CGCGCACCGG CTCGTGTTCG ACAATCCGAC GCCGTACCAC
GTGACGGTGG TCGACGTGAC GGCGGGCGCG CAGAAGACGC CGGTGCCGAT CGAGCCCGTG
ATGGTGGACC CGATGAGCAC GGCCGACGTG CCGTTCAAGG CCGCGACGCC GTCGACGCTG
TTCATCACGC ATATCGACGA TTACGGCGGC CAGGTGGCGG TCGAATATGC GTGTGATGCG
GGCGCTTGCA AGAGCGTGAA GCGATGA
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| Protein sequence | MNPVFSLSFA RRAACMLTVA SALLAGVAHA AIVPDRTRVI FNEGEPAAIV TITNKSTTYP
YLVQSWLEDT RGNKITSPLM VVPPLQRVEA NERNVLRIAK LPGAALPADR ESVFYLNIRE
VPPKTDTPNT LQIALHTQMK LFYRPKGVQP PRDEDWTLPM TLRVDAAAHR LVFDNPTPYH
VTVVDVTAGA QKTPVPIEPV MVDPMSTADV PFKAATPSTL FITHIDDYGG QVAVEYACDA
GACKSVKR
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