| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1537 |
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| Symbol | |
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| ID | 6177521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1707793 |
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| End bp | 1708965 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641681298 |
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| Product | fimbrial protein |
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| Protein accession | YP_001808240 |
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| Protein GI | 172060588 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0520847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.668079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGA TTCGACGGCG CCGGCTCGGG CGAGTCGGCC GGGTGATGCG TCGCCTGGCG
ACGGCGGGAT ACATCCTCGC ATTCGGCACG CACGCAATGG CGCAAGGCGG CAGTGGTGCG
TCCGCGCTGG ATTGCACGTT CAGCAACCCC GAAGCGTCGT CCTGGCGCAT GATTACGCCG
TTGACGAGCA CGACGCCGGT CGGCGCGATC CTGTATCAAC GCACTGTTTC GCTGATGGTC
TCGTTCACGT ACGGCAACGC GGCGACCGAG CACGAACTGG TGAGTGCCGC ACACTGGATG
CCGGGCAGCA TCGTCGCCGA CGGTGTTGCG CAGACGAACG TGAACGGGAT CGGCTTCAAG
TGGGCCGGCG TGTCAGACGA CAGCAACGAG CGCACGCTGC AGCAAGGTGC ACTGCCGGTG
GTAACCGCAA AGACCGCACT CGTTCGATCG GGAGGAACCG GCAACGATAT ACGGATGGCG
CGCTTCCGGC AGTTTCTGGT GCTCGACAAG CCTGTCTCGC AGCTGCCGCA GGGCAAGCTG
ATCATCAAGA ACCTGCCGGG CAATCCGACC GTCGCGATTT ATGCGATCGA CTTTCCGAAA
GGCGTCGCGT CGATCGGCAG CACGGTGACG GTGCCGGAGC AGACGACGCC GCCCAACCTG
TGCAAGCAAG TGAAGACCTT TGTCGGCGTG GGCAACGTCT GCATCGGCAG CGAGTGCGAG
ATCCATGTGC CGAACCGCTG CGAGATCCAG TCGAACATGA TCGTGCCGGT GGCGCTCGGC
AACTTCGCGA TCAGCAATTT TCCCAGCGTG AACGCGATGT CGAAGCCGGT CAGCTTCGAT
ATCGCGCTCA GCCAGTGCGC GGCAGCGGCA AAGCCGTCGA TCAGCTTCCG CGACAAGGCC
GCGCAGCCGA ATCCGGACAA GACGCTGTTG CAACTGAGCG CGCCGGCCGG GCAGACGATC
GCGCGCGGGT TCAACATCGT GATGACGAAT GCGCTGACCG GCGAGCGGAT TGCGTACGGC
GAGCCGGGCG CGGCCACGAA CTATCCGATG CGCCGTACCG GCGACATGGC CGTGATGCCG
TTGCGCGCGC AGTACATTCG CACCGGTGCG GATGCCGAGC TGCAGCCCGG CTATGCCGGC
GGCGGCGCGG AATTTTCGTT TACGTTTCCG TGA
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| Protein sequence | MKTIRRRRLG RVGRVMRRLA TAGYILAFGT HAMAQGGSGA SALDCTFSNP EASSWRMITP
LTSTTPVGAI LYQRTVSLMV SFTYGNAATE HELVSAAHWM PGSIVADGVA QTNVNGIGFK
WAGVSDDSNE RTLQQGALPV VTAKTALVRS GGTGNDIRMA RFRQFLVLDK PVSQLPQGKL
IIKNLPGNPT VAIYAIDFPK GVASIGSTVT VPEQTTPPNL CKQVKTFVGV GNVCIGSECE
IHVPNRCEIQ SNMIVPVALG NFAISNFPSV NAMSKPVSFD IALSQCAAAA KPSISFRDKA
AQPNPDKTLL QLSAPAGQTI ARGFNIVMTN ALTGERIAYG EPGAATNYPM RRTGDMAVMP
LRAQYIRTGA DAELQPGYAG GGAEFSFTFP
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