Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1460 |
Symbol | |
ID | 6178675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1624103 |
End bp | 1624729 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641681217 |
Product | putative ParB-like nuclease |
Protein accession | YP_001808164 |
Protein GI | 172060512 |
COG category | [S] Function unknown |
COG ID | [COG4318] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.530245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACTCG GCAACGACGT TCATCTCATT CCCGTGCGGC TCGACGCATT GCGTCCGACG CAAATGACGG TCGGCTATCG CGAAGTGAAA GCGAAGCGCA GGCACTGGAA AGCGCTCGAC AAGCGCGCGC GCAAGGCCGC GATCGACTCG CACTGGTTTC CGGCCGTCCT CGGCCCCGGC GGCCTCTACT ACATCACCGA TCATCACCAT CTCGGGCTCG CGCTGATCGA GGAAGGGCAG ACGCGCGTGA ACGCGATGCT GCTCAAGGAT CTGTCGTGGC TCGAGGACAC GATCTTCTGG CGGATGATGG AACACAACCA GTGGGTGCAT CCGTTCGGTC CGGACGGCTC GCGCCGCGAC TACGCGAATC TGCCGAAGGT GTTGACGGGG CTCGAGGACG ATCCGTACCG CAGCCTCGCG GGCGAACTGC GCACGGCGGG CGGCTATGCG AAGGATGCGA CGCCGTTCAG CGAATTCCTG TGGGCCGACT ACCTCCGCCA GCATGTGACG CTCGACCAGA TCCGCAAGAA CTTCTCAAAG GCGCTGGACG TCTCGCTGCG CCGGGCACAC GACCAGGACG CGCGCTATCT GCCCGGCTGG TCGGGTGTCA TTGCCGCCAA ACCCTGA
|
Protein sequence | MALGNDVHLI PVRLDALRPT QMTVGYREVK AKRRHWKALD KRARKAAIDS HWFPAVLGPG GLYYITDHHH LGLALIEEGQ TRVNAMLLKD LSWLEDTIFW RMMEHNQWVH PFGPDGSRRD YANLPKVLTG LEDDPYRSLA GELRTAGGYA KDATPFSEFL WADYLRQHVT LDQIRKNFSK ALDVSLRRAH DQDARYLPGW SGVIAAKP
|
| |