| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1389 |
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| Symbol | |
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| ID | 6176118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1542716 |
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| End bp | 1543261 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681144 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001808093 |
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| Protein GI | 172060441 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.261896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCGCTC TCGATTACCA GACTGCCTTT CACCTCGCGC CGCTCGGCCT CGTGATGTCG
CGCGACCGCG TGATCGAGGA CTGCAACGAC GCCCTCGCGT CGATCTTCCG CTGCGCGCGC
GCCGACCTGC TCGGGAAGTC GTACGAGGTG CTCTATCCGT CGCCGGGCGA ATTCCAGCGA
ATCGGCGAAC GCATTTCGCG CGTGATGATC GCGAACGGCA TCTACGCCGA TGACAGAATC
ATGAAACGGG CCGACGGCGA GCTGTTCTGG TGCCACGTGA CGGGCCGCGC GCTCGACCGC
ACCGCACCGC TCGCGGCCGG CATCTGGACC TTCGAGGACC TGAGCGCGAC ACGCCGCGTC
GCCGTCGAGC TGACGCCGCG CGAACGCGAG ATCGCCGCGC AGCTCGCGAC CGGCAAGACC
AGCAAGCAGA TCGGGCGCAT GCTCGACATC AGTTCGCGCA CGGTCGACAT CTACCGCGCG
CGGCTGATGC GCAAGTACGG CACGAACAAT ACGCCGGAGC TGCTGCAACG CCTGCTCGGC
CAGTGA
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| Protein sequence | MPALDYQTAF HLAPLGLVMS RDRVIEDCND ALASIFRCAR ADLLGKSYEV LYPSPGEFQR
IGERISRVMI ANGIYADDRI MKRADGELFW CHVTGRALDR TAPLAAGIWT FEDLSATRRV
AVELTPRERE IAAQLATGKT SKQIGRMLDI SSRTVDIYRA RLMRKYGTNN TPELLQRLLG
Q
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