| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1357 |
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| Symbol | |
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| ID | 6177447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1504431 |
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| End bp | 1506818 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641681112 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001808061 |
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| Protein GI | 172060409 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4252] Predicted transmembrane sensor domain
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.458643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.624704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG ACTCCGTTTC CCCGCGGCGG CGCCTCGGCC GCCGCTTCCT GATCGAATGG
ATCGCGATCG GCTGCCTCGG GATCGCGGTG ATCCTCGCGT GCGCGCTCGG CCGGCTGTCG
TCGAGCGTCG ACGGGCTCAT CTACGACCGG CTGTTGATGC TGCGCAGCCT GCCGCTGTCA
CCCGACGTCG TCGTCGTCGA CATCGACAAC CAGAGCGTGT CCGCGCTCGG CCGCTGGCCG
TGGCCGCGCA GCGTGCATGC GCGGCTGCTC GACACGCTGG CGCGTGCGCA GCCGGCGGCG
GTCGTCTACG ACGTGCTGTT TACCGAGCAG TCGCCCGAGG ATCGTCCGTT CGCGGACGCG
ATGGCCCACG TGCCGACGTT CCTCGCCGTG CTGCTGAGCC CCGAGCAGGC GGACGGCACG
CGCACCGTCG ATCCGCCGGT CGCGGAGCTT GCGGCCCGCG CGACGGGGCT CGGCCACATC
AATCTCGAAG TCGATCCCGA CGGCATCGTG CGCAGCGTCG CGCTGTTCGA AAGCGACGGC
CGCGTGCGCT GGCCGCAACT GATGGTGCCC GTCTACCGCG CGCTCGAGGC CGGCCGGCTG
CATCCGGTCG GCGGGGCGCC CGGCGCGCAT GCGCACGACC TGTCGCGCGA CCTGACAGGC
GAGGGCCGCT ACCTGATCCC GTTCAGCCGC AACACCCCCG CGTATCCGAC GCTGTCGTTC
GACGACGTGC TCGAAGGGCG CGTGAAACCC GACGCGCTGC GCGGCAAGAT CGTCGTCGTC
GGCGTGACCG CGTCGGGCCT CTACGACCGC TTCGCGACTC CGGTGTCGGG CGAGTTCGGC
CCGCTCGCGG GCGTGTACAT CCACGCGAAC GTGCTCGACA TGCTGACGAC CGGCAGCGCG
ATCCTGCCCG TGTCGCGCGC GGGGCTGTTC GTCGCGTCGC TGCTGCCGCT CGCGGTGCTG
CTGGCCGGCT TCCTGATGCT GTCGCCGTGG CGCGGCCTCC TGCTGACGCT GAGCCTGGCG
GCGGCGGCCG TCGTCGCGAG CGTCGCGCTG TTGTTCGAGG CGCGCGTGTG GCTGTCGCCC
GCGCCCGCGA TCTTCGGGCT GATCGCCGTG TATCCGATCT GGAACTGGCG GCGCCTCGAA
ATGACGATGT CGTACCTGCG CCGCGAGCTG CAGCGGCTCG CCGACGAGCC GCACCTGCTG
CCCGAGGCGC CGCGCACGCG CAGCGTCGGC GGCGACGTGC TCGAACGTCA GATGGCGCTG
ATGGCGCAGG CCGCGCAGCG CGTGCAGGAC ATGAAGCGCT TCGTGTGGGA CAGCCTCGAC
AGCATGCCGG AACCGATCTT CGTCACCGAC CTGGCCGGCA CCGTGCTGAT CGCGAACCAC
GCGGCGAAGC GCTACGGGGC GCGGCTCGCG CTGCCGTTGC CGGAAGGGCG GCCGCTGCGC
GCCGCGCTCG GCGAGCTGAC CTTCATGAAG ACCGTCGACG GCAACGTCGA ACACGACGTC
GCGATCCGCG AACACTGGCC GGCCGCGCTC GACCCGACGC TCGAGGCCGA GCACGACGCG
ATGGCGCGCG GCATCGAGGT GCGCGACCGC GACGGGCTCG ACCATCTGCT ACGCTACGCG
GCATGTACGA ACGCGCAGGG CCACGTGACG GGCTGGATCG CCGGCCTCGT CGACGTGACC
GAGCTGCATG CGGCCGAGCG GCAGCGCGAG GAGGCGCTGC ACCTGCTGTC GCACGACATG
CGCTCGCCGC AGTCGTCGAT CCTCGCGCTC GTCGAGATCG AGCGCGAACG CGTCGAGACC
GACGCGACGC GCCGGCTGCT CGCGCGAATC GAGCGGTATG CGCATCGTGC GCTGTCGCTC
GCCGACGAGT TCGTGCAACT GGCGCGCGCG GAGTCGCAGG CGTACCAGCT CGAGCCGACG
AGCCTCGTCG ACGTGCTGAT CGACGCGAGC GACGAAGTCT GGCCGCAGGC GCAGGCCAAG
CGCATCCGCA TCGACACCGA CGTCGGCACC GACATGGGCT GGACGCGCGC CGACCGCTCG
CTGATCACGC GCGCGTTCGT CAACGTGCTG AACAACGCGG TCAAATACAG TCCGTCCGAC
ACGGTGATCA CGTGTACGCT GACGATCGAG CACGCATCGA GGCGGATGTT CTGTACGATT
CGCGATCAGG GGTACGGCAT CGCGCCGGAA GATCAGCGGC ATCTGTTCGA GCGTTTCAAG
CGGTTCCATG CCGGCGAGCG GCCCGAAATC TCGGGCTCCG GGCTCGGCAT GGCATTCGTG
AAGACGGTCG TCACGCGCCA CGGCGGCAGC GTGACGGTCG ACAGCGAAGT GGGTGTCGGC
ACCGCGGTGA CGGTGTCGCT GCCCGCGATC GACGAGCCGT CCGCCTGA
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| Protein sequence | MKTDSVSPRR RLGRRFLIEW IAIGCLGIAV ILACALGRLS SSVDGLIYDR LLMLRSLPLS
PDVVVVDIDN QSVSALGRWP WPRSVHARLL DTLARAQPAA VVYDVLFTEQ SPEDRPFADA
MAHVPTFLAV LLSPEQADGT RTVDPPVAEL AARATGLGHI NLEVDPDGIV RSVALFESDG
RVRWPQLMVP VYRALEAGRL HPVGGAPGAH AHDLSRDLTG EGRYLIPFSR NTPAYPTLSF
DDVLEGRVKP DALRGKIVVV GVTASGLYDR FATPVSGEFG PLAGVYIHAN VLDMLTTGSA
ILPVSRAGLF VASLLPLAVL LAGFLMLSPW RGLLLTLSLA AAAVVASVAL LFEARVWLSP
APAIFGLIAV YPIWNWRRLE MTMSYLRREL QRLADEPHLL PEAPRTRSVG GDVLERQMAL
MAQAAQRVQD MKRFVWDSLD SMPEPIFVTD LAGTVLIANH AAKRYGARLA LPLPEGRPLR
AALGELTFMK TVDGNVEHDV AIREHWPAAL DPTLEAEHDA MARGIEVRDR DGLDHLLRYA
ACTNAQGHVT GWIAGLVDVT ELHAAERQRE EALHLLSHDM RSPQSSILAL VEIERERVET
DATRRLLARI ERYAHRALSL ADEFVQLARA ESQAYQLEPT SLVDVLIDAS DEVWPQAQAK
RIRIDTDVGT DMGWTRADRS LITRAFVNVL NNAVKYSPSD TVITCTLTIE HASRRMFCTI
RDQGYGIAPE DQRHLFERFK RFHAGERPEI SGSGLGMAFV KTVVTRHGGS VTVDSEVGVG
TAVTVSLPAI DEPSA
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