| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1342 |
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| Symbol | |
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| ID | 6177534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1487132 |
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| End bp | 1489087 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641681097 |
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| Product | ribokinase-like domain-containing protein |
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| Protein accession | YP_001808046 |
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| Protein GI | 172060394 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0524] Sugar kinases, ribokinase family
[COG3892] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCGT TGAACTTTCC GACTGACCGC CCCATCGATC TCGCTTGCCT CGGCCGCGTC
GCCGTGGATC TTTACGCGCA GCAGTACGGC AGCCGCCTGG AGGACGCACG CAGCTTCCAG
ATGTATCTCG GCGGCTCGTC GGGCAACGTC GCGTTCGGCG TCGCGCGGCT CGGGCTGAAG
ACCGCGATGA TCTCGCGCGT CGGCGACGAG CAGATGGGCC GCTTCGTGCG CGAGACGCTC
GAGCGCGAAG GTTGCGATAC GAGCCAGCTG CAGACCGATC CGGAACGCCT GACCGCGCTC
GTGCTGCTCG GGCTGAAGGA CCGCGACACG TTCCCGCTGC TGTTCGTGCG CGAGAACTGC
GCGGACATGG CCGTGCGCGC CGACGAGATT CGCGAGGACT TCATCGCCGG CTGCCGCGCG
CTCGCGATCA CCGGCACCCA TCTTTCGACG CCGGCCACGC GCGAAGCGTC GCTGACCGCG
CTCGGCTACG CGCGCCGCCA CGGCGTCGTG CGCATTCTCG ACATCGATTA CCGGCCGGTG
CTGTGGGGGC TGACCGCGCG CGGCGCGGGC GAGAACCGCT ACGTGCCGGA CGCGCAGGTC
ACGCGGCAGC TGCAGCAGGT GCTCGGCGAG TTCGACCTGC TGGTCGGCAC CGAGGAGGAA
TTCCTGATCG CGGGCGGCGT GCCGCACGAC CTGATCGCGT CGCTTCAGGC CGTGCGCCGC
GCGAGCGGCG CGGTGCTGGT GGTCAAGCGC GGCGCGCTCG GCTGCTGCGT GATCGAGGGC
GACATCCCCG CGCGCATCGA CGATGCACCG ACTTTCCACG GCGAACGCGT CGAAGTCCTG
AACGTGCTCG GCGCGGGCGA CGCGTTCCTG TCGGGTCTGC TGTCCGGCCT GCTGCGCGGG
CGCGACTGGA CGGAAGCCAC ACGCATCGCG AATGCGTGCG GCGCGATCGT CGTGTCGCGC
CATGCGTGCT CGGCCGCGAT GCCGACGCCG GCCGAGCTCG CTCACTGGTT CGGCGGCAGC
CGCCACCCGC AGGTCGACGC CGATCGCACG CTCGCGCACC TGCATCGCGT GACGGTGCCG
CGCCGCGAAT GGGACGAGCT GTGCGTGATG GCGTTCGACC ATCGCAGCCA GTTCTACGAA
CTCGCGGTGC AGGCCGGCGC GGACGAAGCT CAAATCAAGA CGCTCAAGCG CCTGCTCGTG
CGCGCGGTCG AACAGGTCGA GCGCGATCGT CATCTCGAAG GCCACGTCGG CGTGCTGATC
GACGGCGGCG CATACGGCCG CGACGCGCTC GCGCAGGCCA CCGGCCGCGG CTGGTGGGTC
GGCCGGCCGG TCGAGCTGCC GGGCTCGCGG CCGCTGCGTT TCGACGACAC GCGCTCGGTC
GGCTCGTCGC TCACGCACTG GCCGACCGAA CAGGTCGTGA AGTGCCTCGT CCACTACCAC
CCCGACGACG ACGTCGACCT GCGCGTCGAG CAGGAGCAGC GCGTGCTGGA ATTGTGGGAA
GCCACGCGCG AAAGCGGCAA CGAGCTGCTG CTCGAAATGA TTCCGCCGCG CGCGGTCACG
CCGGCCGGCA CCGAGGACGA CGCGGTGCTG CGCACGGTCG CGCGGTTCTA CAACCTCGGC
GTGATGCCCG AGTGGTGGAA GCTCCCGCCG CTGAGCGCCG ACGGCTGGGC GCGGCTCGAG
ACGCTCGTGG CCGAGCGCGA CCATCACTGC CGCGGCGCGG TGATCCTCGG GCTGAACCAG
CCGCTCCAAT ACCTGGTCGA CAGCTTCCGC TCGGCGACCA ACCCGATCGT CAAGGGCTTC
ATGGTCGGGC GCACGCTGTG GGCCGATGCG TCGCTGCGCT GGCTCGCCGG CCAGAGCGAC
GACCAGGCTC TGATCGACGA AGTGGCCGGC AATTTCACGC AGCTGGTCGA CGCGTGGCTC
GGCCGCCGTG CCGCCGCGCG CGCCGCCGCG GCCTGA
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| Protein sequence | MSPLNFPTDR PIDLACLGRV AVDLYAQQYG SRLEDARSFQ MYLGGSSGNV AFGVARLGLK
TAMISRVGDE QMGRFVRETL EREGCDTSQL QTDPERLTAL VLLGLKDRDT FPLLFVRENC
ADMAVRADEI REDFIAGCRA LAITGTHLST PATREASLTA LGYARRHGVV RILDIDYRPV
LWGLTARGAG ENRYVPDAQV TRQLQQVLGE FDLLVGTEEE FLIAGGVPHD LIASLQAVRR
ASGAVLVVKR GALGCCVIEG DIPARIDDAP TFHGERVEVL NVLGAGDAFL SGLLSGLLRG
RDWTEATRIA NACGAIVVSR HACSAAMPTP AELAHWFGGS RHPQVDADRT LAHLHRVTVP
RREWDELCVM AFDHRSQFYE LAVQAGADEA QIKTLKRLLV RAVEQVERDR HLEGHVGVLI
DGGAYGRDAL AQATGRGWWV GRPVELPGSR PLRFDDTRSV GSSLTHWPTE QVVKCLVHYH
PDDDVDLRVE QEQRVLELWE ATRESGNELL LEMIPPRAVT PAGTEDDAVL RTVARFYNLG
VMPEWWKLPP LSADGWARLE TLVAERDHHC RGAVILGLNQ PLQYLVDSFR SATNPIVKGF
MVGRTLWADA SLRWLAGQSD DQALIDEVAG NFTQLVDAWL GRRAAARAAA A
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