Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1336 |
Symbol | |
ID | 6177615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1481109 |
End bp | 1481813 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641681091 |
Product | ABC transporter related |
Protein accession | YP_001808040 |
Protein GI | 172060388 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.256607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC TGCTCGACAT TCGCGGCCTG CGCGCGTGGT ACGGGATGCA GCCCGTGCTC GACGGCGTCG ATCTCGCGCT CGCGCCGGGC GAGACGCTCG CGCTGCTGGG CCGCAACGGC TCGGGCCGCT CGACGCTCGC GAAGGCCGTG GTGGGGCTCG TGCGCACCGC GGGCTCGGTG CGCATCGGGG GCGCCGAATG CGCGGGCGCC CGCACATTCG AGATCGCGCG GCGCGGCGTG GCTTACGTCG CCGAAAGCCG CGACGTGTTT CCGCTGCTGA GCGTGCGCGA GAATCTGCGG CTCGGGCTGC GCGGTGCGCG CGGCGCGGCC GAACGCGCGG CGCTCGACCG GCTGCTCGCG CGCTTTCCGC TGCTGGCCGC GCGGATCGAC GTGAAGGCCG GGCGGCTGTC GGGCGGCGAG CAGCAGGTGC TCGCGCTGGT GCGTGCGCTT GCCGGCTGCC CGCGCGTGCT GATCGTCGAC GAACCGGCCG AAGGGCTCGC GCCGCTCGCG GTCGACGAGG TCGGTGCGTG CCTCGCCGCG CTGCAGGCCG ACGGCGTCGC GATCCTGCTG ATCGAGCAGC GGTTGCAGCT CGCGCCGCGG CTCGCGCAGC GCGTCGCGGT GATGGGGCGG GGACGGATCG TCTACGACGG CGCGCTCGAC GGGCTCGGCG GCGACGTCGT CAGTGCGTGG CTCAGCGCCG GCTGA
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Protein sequence | MSALLDIRGL RAWYGMQPVL DGVDLALAPG ETLALLGRNG SGRSTLAKAV VGLVRTAGSV RIGGAECAGA RTFEIARRGV AYVAESRDVF PLLSVRENLR LGLRGARGAA ERAALDRLLA RFPLLAARID VKAGRLSGGE QQVLALVRAL AGCPRVLIVD EPAEGLAPLA VDEVGACLAA LQADGVAILL IEQRLQLAPR LAQRVAVMGR GRIVYDGALD GLGGDVVSAW LSAG
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