Gene BamMC406_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1336 
Symbol 
ID6177615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1481109 
End bp1481813 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content76% 
IMG OID641681091 
ProductABC transporter related 
Protein accessionYP_001808040 
Protein GI172060388 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.256607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC TGCTCGACAT TCGCGGCCTG CGCGCGTGGT ACGGGATGCA GCCCGTGCTC 
GACGGCGTCG ATCTCGCGCT CGCGCCGGGC GAGACGCTCG CGCTGCTGGG CCGCAACGGC
TCGGGCCGCT CGACGCTCGC GAAGGCCGTG GTGGGGCTCG TGCGCACCGC GGGCTCGGTG
CGCATCGGGG GCGCCGAATG CGCGGGCGCC CGCACATTCG AGATCGCGCG GCGCGGCGTG
GCTTACGTCG CCGAAAGCCG CGACGTGTTT CCGCTGCTGA GCGTGCGCGA GAATCTGCGG
CTCGGGCTGC GCGGTGCGCG CGGCGCGGCC GAACGCGCGG CGCTCGACCG GCTGCTCGCG
CGCTTTCCGC TGCTGGCCGC GCGGATCGAC GTGAAGGCCG GGCGGCTGTC GGGCGGCGAG
CAGCAGGTGC TCGCGCTGGT GCGTGCGCTT GCCGGCTGCC CGCGCGTGCT GATCGTCGAC
GAACCGGCCG AAGGGCTCGC GCCGCTCGCG GTCGACGAGG TCGGTGCGTG CCTCGCCGCG
CTGCAGGCCG ACGGCGTCGC GATCCTGCTG ATCGAGCAGC GGTTGCAGCT CGCGCCGCGG
CTCGCGCAGC GCGTCGCGGT GATGGGGCGG GGACGGATCG TCTACGACGG CGCGCTCGAC
GGGCTCGGCG GCGACGTCGT CAGTGCGTGG CTCAGCGCCG GCTGA
 
Protein sequence
MSALLDIRGL RAWYGMQPVL DGVDLALAPG ETLALLGRNG SGRSTLAKAV VGLVRTAGSV 
RIGGAECAGA RTFEIARRGV AYVAESRDVF PLLSVRENLR LGLRGARGAA ERAALDRLLA
RFPLLAARID VKAGRLSGGE QQVLALVRAL AGCPRVLIVD EPAEGLAPLA VDEVGACLAA
LQADGVAILL IEQRLQLAPR LAQRVAVMGR GRIVYDGALD GLGGDVVSAW LSAG