Gene BamMC406_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1277 
Symbol 
ID6178059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand+ 
Start bp1411495 
End bp1412100 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content70% 
IMG OID641681035 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001807984 
Protein GI172060332 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.184378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCT ACGCACTCAA ACCGAAATTC CAGAACCGTC TGCGTCCGTT CGCGGATTCG 
CTTGCCGAAC GCGGCGTCAC CGCCAACCAG GTCACGCTGT TCGCGGCCGG CGGCTCGATC 
GTCGTCGGCG CGCTCGCGGG GCTCGGCGTG TTCGCCCGCG TGCTGTTCCT GCTGATCCCG 
ATCTGGCTGT TCGCGCGGAT GGCGCTCAAC GCGATCGACG GCATGCTCGC CCGCGAACAC 
GGGCAGAAGA GCACGCTCGG CGCGTACCTG AACGAGCTCG GAGACGTCGT GTCCGATGTC 
GCGCTCGTGC TGCCGTTCCT CGCGATTCCC GCGTTCGCTC CGGCGGACGT CTGGCTGTTC 
GCGCTGATGG CGGTCATCGT CGAATGCGCG GGGCTGATCG GCCCGCTCGC TGGTGCGACG 
CGCCGCTACG ACGGCCCGTT CGGCAAGAGC GACCGCGCGC TCGCGCTCGG CGCGTTCGCG 
CTGTGGATCG GCTTCGGCCT GCCGGTCGGC AGCGTCGCCG CGTGGCTGTG GCGCGTGCTG 
ATCGTGCTGT CGATCGTGAC GGCGGTGCGG CGCGTGCAGG CCGGCGTCGC CGAAGCGGGC 
GGCTGA
 
Protein sequence
MSLYALKPKF QNRLRPFADS LAERGVTANQ VTLFAAGGSI VVGALAGLGV FARVLFLLIP 
IWLFARMALN AIDGMLAREH GQKSTLGAYL NELGDVVSDV ALVLPFLAIP AFAPADVWLF 
ALMAVIVECA GLIGPLAGAT RRYDGPFGKS DRALALGAFA LWIGFGLPVG SVAAWLWRVL 
IVLSIVTAVR RVQAGVAEAG G