Gene BamMC406_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1276 
Symbol 
ID6178058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1410396 
End bp1411043 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content68% 
IMG OID641681034 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_001807983 
Protein GI172060331 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0870387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC TGAACGTCTG GCAGCGCGAT TTCCTGCTGT CGATCGTCCG GCTCGTCGCC 
GGCGCGTATC CGGTCTGGCA TCAGGCGCCG CCGTCGCCGA CGCAGAAGAT CTACTTCTCG
AACCACACGA GCCACATCGA CACGCTCGCG ATCCTCGCCG CGCTGCCGCG CGACGTGCGC
GCGGTCGTGC GGCCGGTCGC CGCGCGCGAC TACTGGGACA GCAGCGACCT GAAGCGCCAT
ATCGCGCAGA AGCTGCTGAA CGTCGTGCTG ATCGACCGGC ATCGCGAAAA CGGCGGCAAT
CCTCGGGGCG GCCACCCGCT CGACCCGGTG CGCGACGCGC TGCGGCAAGG CCACTCGATC
ATCATCTTCC CGGAAGGCAC GCGCGGCGCC GACGTGTTGC CGCAGCCATT CAAGAGCGGC
CTGTTCCATC TCGCGACGGA ATTTCCGAAC GTCGCGCTCG CGCCGGTCTA TCTCGAGAAC
CTGCAGCGCA TCATGCCGAA GGGCGCGATC TGGCCCGTGC CGCTGATCTG CAAGGTGCAC
TTCGGTGCGA ACGACGCGCT CGGCGCCGGC GAAGACAAGC CGACCTTTCT CACCCGCATG
CGCGACGCGA TCGTCGCGCT CGCGCCGCCG CAGCGGCCGG CCGGCTGA
 
Protein sequence
MNILNVWQRD FLLSIVRLVA GAYPVWHQAP PSPTQKIYFS NHTSHIDTLA ILAALPRDVR 
AVVRPVAARD YWDSSDLKRH IAQKLLNVVL IDRHRENGGN PRGGHPLDPV RDALRQGHSI
IIFPEGTRGA DVLPQPFKSG LFHLATEFPN VALAPVYLEN LQRIMPKGAI WPVPLICKVH
FGANDALGAG EDKPTFLTRM RDAIVALAPP QRPAG