Gene BamMC406_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1259 
Symbol 
ID6177508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1393609 
End bp1394589 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content71% 
IMG OID641681017 
Productalcohol dehydrogenase 
Protein accessionYP_001807966 
Protein GI172060314 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC TGATGTGTAC CGCATTCGGC CCGATCGACC GCTTGCGTAT CGACGACGTC 
GCGATTCCCG AACCGGCCGC GGGCCAGGTG CGGATTCGCG TGAAGGCGGC GTCGCTCAAT
TTCCCCGATG CGCTGATCGT CCAGGGGCTG TATCAGGTGA AGCCGGCGCT CCCGTTCTCG
CCCGGTGCGG AATTCGCCGG CGTGATCGAC GCGGTCGGCG ACGGCGTGAG CGCATGGCGG
CCGGGCGACG AGGTGGTCGC GTTCACCGGT CACGGCGGCT TCGCCGAGCA GTGCGTGGCC
GACGTGCACC AGATCGCGGC GCTGCCGCCG GGGATGACGT TCGAGCAGGG CGCGGCGCTG
GTGCTGGCCT ACGGAACGTC GCTGCATGCG CTGCAGCAGC GCGCGCGTCT GCAGCAGGGC
GAGACGCTGC TGGTGCTGGG TGCGGCGGGC GGTGTCGGGC TGGCGGCGAT CGAGATCGCG
AAGGCGCTGG GCGCGCGCGT GATCGCGGCC GCGTCGAGCG CGGACAAGCT CGCGCTGTGC
CGCGACGCCG GCGCCGACGA CACGATCGAC TATGCGACCG AGGACCTGCG GCGCCGTGTC
GACGAACTGA CGGGCGGGCG CGGCGCGGAC GTCGTCTACG ATCCGGTCGG CGGAGCGTAC
AGCGAGGCGG CGCTGCGCGC GACCGCGTGG CGCGGCCGGT TCCTCGTGGT CGGTTTCGCG
GCCGGCGAGA TTCCGAAGAT CGCGCTGAAT CTGGCGCTGC TCAAGGAGCG CGATATTCTC
GGCGTGTTCT GGGGCGATGC GGTGCGGCGC GATCCCGCGG AGCACGCTGT GAACATGCGC
CAGCTGGCGC AATGGTTCGC GGCCGGCAAG GTGCGGCCGG CGATCACCGA GCGCGTGCCG
CTGTCGGGTG CGGCCGACGC GATCGCGCGC ATGGCGAACC GGCAGGTCAA GGGCAAGGTC
TTGATCCTGC CGGACGCGTG A
 
Protein sequence
MKALMCTAFG PIDRLRIDDV AIPEPAAGQV RIRVKAASLN FPDALIVQGL YQVKPALPFS 
PGAEFAGVID AVGDGVSAWR PGDEVVAFTG HGGFAEQCVA DVHQIAALPP GMTFEQGAAL
VLAYGTSLHA LQQRARLQQG ETLLVLGAAG GVGLAAIEIA KALGARVIAA ASSADKLALC
RDAGADDTID YATEDLRRRV DELTGGRGAD VVYDPVGGAY SEAALRATAW RGRFLVVGFA
AGEIPKIALN LALLKERDIL GVFWGDAVRR DPAEHAVNMR QLAQWFAAGK VRPAITERVP
LSGAADAIAR MANRQVKGKV LILPDA