| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1208 |
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| Symbol | |
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| ID | 6177879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1335755 |
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| End bp | 1336537 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680964 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001807915 |
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| Protein GI | 172060263 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCTCG AAGACAAGGT CGTCATCGTC ACTGGGGGCT CGCGGGGCAT CGGCCGGGCC
ATCGCCGTCG CCAGCGCGCG TGAAGGCGCG GACGTGGTCG TCAATTACTG GGGCGACAAC
GACGCGTCGT ATGGGCGGCG CTCCGCCATC GCCGAAGTCG TCGCTGAAGT CGAGCGCGCG
GGCCGGCGTG CCATCGCGAT CGAGGGTAAC GTCGCGCTGC CGCAAACCGG CATCGACCTG
GTTCGCCATG CGGTAGACGC GTTCGGCAAG GTCGACGTGC TGGCCAGCAA CGCCGGCATC
TGTCCGTTTC ATGCGTTTCT CGACATGCCT CCGTCGGTCC TGGAGCGCAC GATCGGCGTC
AATCTGAACG GTGCGTTCTA TGTGACGCAG GCGGTTGCAC GTCAGATGAA GGAGCAGGGA
ACGGGCGGCG CGATCGTCGC GACCAGTTCG ATCAGCGCAC TCGTGGGCGG CGGCATGCAG
ACGCATTACA CGCCGACGAA GGCGGGTGTG CATTCGTTGA TGCAGTCGTG CGCGATTGCG
CTCGGCCCAT ACGGTATTCG CTGCAATTCC GTGATGCCGG GGACGATCGC GACCGATCTG
AACGCCGCGG ATCTCGAGGA CGAAGACAAG CGGCGCTATT TCGAGAAACG CATCCCGCTC
GGCCGGCTGG GGCAGCCCGA GGACGTTGCC GATTGCGTGG TGTTCCTCGC GTCCGACCGC
GCGCGCTATG TGACGGGTGC CGCGCTACTG GTCGATGGCG GGATGTTCGT GAACCTGCAG
TGA
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| Protein sequence | MLLEDKVVIV TGGSRGIGRA IAVASAREGA DVVVNYWGDN DASYGRRSAI AEVVAEVERA
GRRAIAIEGN VALPQTGIDL VRHAVDAFGK VDVLASNAGI CPFHAFLDMP PSVLERTIGV
NLNGAFYVTQ AVARQMKEQG TGGAIVATSS ISALVGGGMQ THYTPTKAGV HSLMQSCAIA
LGPYGIRCNS VMPGTIATDL NAADLEDEDK RRYFEKRIPL GRLGQPEDVA DCVVFLASDR
ARYVTGAALL VDGGMFVNLQ
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