| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1118 |
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| Symbol | |
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| ID | 6176401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1233899 |
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| End bp | 1235179 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680874 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001807825 |
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| Protein GI | 172060173 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACATA ATCGACGTGA ACGGGCGAAA GCGCCGGGGC TCGAATCCGG CGGCAGGACG
GCTGCTTGTC GGCCAGTGGC CGCCGTGGCA GCGGGCACGT CGTGGCTGGC GGTCCTGACG
ATCGCGGCGG TCGTGCTGAA CGGATGCGCG CTGGCGCCGG GCATGAGCTT CAGCGACAGT
TCGGCAGGGG GCGCCGCGCC CACGGCACGG TTTGGCGACG CGTCGCGGGC GGTCCACGAT
GCCAGAGGCA CTGGCGGGAA GGGCTCGGCT GGATCCGGAC GCGATGCGGC CCCCGCGGGC
TCGCTGATCG AGATCAATGA CGAGCTCATC CGTACCGAAC GCGCCGCCGT CGAACCGGGC
ATTCCGACGA ACGTGCGCAA ACTGTTTGCC CGGCCCGGCC CCTATACGCT CGGTCCCGGC
GATGTGTTGA GCATCGTCGT CTGGGATCAT CCGGAGCTCA ACATGCCGCC CCCGACGATC
GGCGCCGGCG TGGACGCAGC CGGATCGAAC TCGGTCGTCG CCGGCTACAC GGTCGATTCC
GGTGGCAACG TGCAATTTGC CTATGCAGGC CCGATCAAGC TGAGCGGCCT GACCGAGATG
AAAGCGCGCG ACCTGCTGGC GTCGAAGATC GCGCGCTATA TCCGCAACCC GCAGGTGACG
CTGCGCATAC AGGCATATCG CAGCAAGCGC GTCTATCTCG ACGGAGAAGT GCGCAACCCG
GGCATCCAGA TCCTCAACGA CCTGCCGATG ACGTTGCCCG AGGCGATCAA CCGGGCGGGT
GGCTTTACCG CCAACGGCGA TCGTGCGGCG GTCGCGGTGA CGCGTGGCGA CGATACCGCC
GTCGTCGACA TCGCCGCGAT GATCGAAAAT GGCATCAATC CGGACAAGAT CCTGCTGCGC
GACGGCGACC TCGTGCGCGT GTACTCCGTG AACGACCGAA AGGTGTTCGT GCTGGGCGAG
GTTGGGCGCG CGACCTCGCT GCCGCTCAAC AACGGACGGC TGTCGCTGAA CGAGGCCCTC
GGGTCCGCCG GCGGGGTCAG CCAATACTCG GGCGATGCCG GGCAGGTGTA TGTCGTGCGC
AACAAGCGTC CTGGCAAACC GGAAATTTTC CATCTCGACG CTCGATCGCC GGTTGCAATG
GCGCTGGCCA ACGACTTCGA ACTGAAGCCG AACGATGTCG TGTTCGTCGA TGCGTCGCCG
CTCGTTCGCT GGAGCCGCGT CATCAACATG CTCCTGCCGA GCGCGCAGAC CCTCGCCACC
GGTCGAAACG CTGCGTACTG A
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| Protein sequence | MLHNRRERAK APGLESGGRT AACRPVAAVA AGTSWLAVLT IAAVVLNGCA LAPGMSFSDS
SAGGAAPTAR FGDASRAVHD ARGTGGKGSA GSGRDAAPAG SLIEINDELI RTERAAVEPG
IPTNVRKLFA RPGPYTLGPG DVLSIVVWDH PELNMPPPTI GAGVDAAGSN SVVAGYTVDS
GGNVQFAYAG PIKLSGLTEM KARDLLASKI ARYIRNPQVT LRIQAYRSKR VYLDGEVRNP
GIQILNDLPM TLPEAINRAG GFTANGDRAA VAVTRGDDTA VVDIAAMIEN GINPDKILLR
DGDLVRVYSV NDRKVFVLGE VGRATSLPLN NGRLSLNEAL GSAGGVSQYS GDAGQVYVVR
NKRPGKPEIF HLDARSPVAM ALANDFELKP NDVVFVDASP LVRWSRVINM LLPSAQTLAT
GRNAAY
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