| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1114 |
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| Symbol | |
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| ID | 6177636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1228656 |
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| End bp | 1229552 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641680870 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001807821 |
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| Protein GI | 172060169 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.731426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCGC TTTCCGGTTC GTCCGCGCCG TCGCCGGCGC CCGCTCCGTC GCATGCGAAC
GGCGTCGCAC GACGCGCGCC GCGCGTCACG GGCGCGCGCG CGATCGCCGC GCTGCAATGG
AGCGTCACGC TGCTGCTGTG CGCATTCCTG ATTGTGCCCG TCGTGATGTC GGTGCTCGCG
GGCCTCACCG TCAACTATTT CCGCGGGCTG TCGAGCGGCC TGACGCTGCG CTGGCTCGAA
CAGGTGTGGC AGCAATACCA GGGCTCGGTC GCGCTGTCGC TCGGTGTCGC GTTCGCGACG
CTCGCGATCG TGCTCGCCGT CGGCGTGCCG GCCGGCTATG CGCTCGCGCG CAGCAAGAGC
CGCGTCGCCC GCGCGATCGA GGAAGCGCTG GTGCTGCCGG TCGCGCTGCC GGGCCTCGCG
TCGGCGCTCG CGCTGCTGGT CGTGTACGGC GGCTTCACCG CGTTCCGGAT GAGCCTGTGG
TTCATCGTCG TCGGCCACGT CGTGTTCACG CTGCCATTCA TGGTGCGCGC GGTCTCGGCC
GTCGCGGCGG GTGCCGACCT GCGCACGCTC GAGGAAGGCG CGGCGAGCCT CGGCGCGTCG
TTCGTCACGC GCTTCGTGAC GATCGTGCTG CCGAACCTGC GCCCCGGCAT CGTCGCGGGC
GCGCTCGCGG TGCTCACGCT GTCGATCGGC GAATTCAACC TGACGTGGAT GCTGCACACG
CCCGACACGA AGACGCTGCC CGTCGGACTC GCCGATACCT ATGCATCGCT GCGTCTCGAA
GTCGGCAGCG CCTACACGAT CGTGTTCCTG CTGATGACGC TGCCGCTCCT CGTCGCGATG
CAGTGGCTCG GCGTCGATCC GTCCGGCACG CGCGCGCTCA AGCGCCGCCC GCGCTGA
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| Protein sequence | MQSLSGSSAP SPAPAPSHAN GVARRAPRVT GARAIAALQW SVTLLLCAFL IVPVVMSVLA
GLTVNYFRGL SSGLTLRWLE QVWQQYQGSV ALSLGVAFAT LAIVLAVGVP AGYALARSKS
RVARAIEEAL VLPVALPGLA SALALLVVYG GFTAFRMSLW FIVVGHVVFT LPFMVRAVSA
VAAGADLRTL EEGAASLGAS FVTRFVTIVL PNLRPGIVAG ALAVLTLSIG EFNLTWMLHT
PDTKTLPVGL ADTYASLRLE VGSAYTIVFL LMTLPLLVAM QWLGVDPSGT RALKRRPR
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