Gene BamMC406_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1106 
Symbol 
ID6176621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1219767 
End bp1220018 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content61% 
IMG OID641680862 
Productpentapeptide MXKDX repeat-containing protein 
Protein accessionYP_001807813 
Protein GI172060161 
COG category 
COG ID 
TIGRFAM ID[TIGR02953] pentapeptide MXKDX repeat protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.31289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATG GACTGCTGGC TGCCTGTGTC GCCGCTTTCG CGATGGTTGC CGTGAGCGCG 
CATGCGCAGA ACGATGCGAT GTCGAAGGAC GGCACGTCGA TGTCGAAGGA CGCGATGGGC
CACGACGCGA TGGCGAAGGA CGGCGCGATG AAGAAGGGCA CCATGAAGAA GCATGCGATG
AAGAAGGACG CGATGGGCCA CGACGCAATG GGCAAGACGA CGCCGAGCGA CAAGATGGCG
CCGTCGAACT GA
 
Protein sequence
MKNGLLAACV AAFAMVAVSA HAQNDAMSKD GTSMSKDAMG HDAMAKDGAM KKGTMKKHAM 
KKDAMGHDAM GKTTPSDKMA PSN