| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1105 |
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| Symbol | |
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| ID | 6176617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1217336 |
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| End bp | 1219267 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641680861 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001807812 |
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| Protein GI | 172060160 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.324786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA ATCCGAAGTT TCTGTCCGCC GACGCCCACG TCGATGCCGC TGCCGTCGCG
CCGCTGCCCA ATTCGCGAAA GGTTTATGTA ACCGGCTCGC AGCCCGACAT CCGCGTGCCG
ATGCGTGAAA TCACGCAGGC CGACACGCCG ACCGGCTTCG GCGGCGAAAA GAATCCGCCG
ATCTACGTGT ACGACACGTC GGGCCCGTAC ACCGATCCGG ACGCCAAGAT CGACATCCGC
GCGGGCCTGC CCGCGCTGCG CCAGGGCTGG ATCGAAGCGC GCGGCGACAC CGAAGTGCTC
GACGGCCTGT CGAGCCAGTA CGGCCTCGAG CGCGCGGCCG ACCCGGCCAC CGCCGACCTG
CGTTTTCCGG GCCTGCACCG CAACCCGCGC CGTGCGCAGC CGGGCAAGAA CGTCACGCAG
ATGCACTACG CGCGTCAGGG CATCATCACG CCGGAAATGG AATACATCGC GATCCGCGAG
AACCAGCGCC GCGCCGAGTA CATCGAGAGC CTGAAGTCGA GCGGCCCGAA TGGCGCGAAG
CTCGCCGCGA TGATGGGCCG CCAGCACCCG GGCCAGGCGT TCGGCGCCGC GGCCTTCGGC
GCGAACGCGC TCGCCGAGAT CACCCCCGAG TTCGTGCGCG ACGAAGTCGC GCGCGGCCGC
GCGATCATCC CCGCGAACAT CAACCACCCG GAATCCGAGC CGATGATCAT CGGCCGCAAC
TTCCTCGTGA AGATCAACGC GAACATCGGC AACTCGGCCG TCACGTCGTC GATCGGCGAG
GAAGTCGACA AGATGACGTG GGCGATCCGC TGGGGCGGCG ACACCGTGAT GGACCTGTCG
ACCGGCAAGC ACATCCATGA AACGCGCGAG TGGATCATCC GCAACAGCCC AGTGCCGATC
GGCACGGTGC CGATCTACCA GGCGCTCGAA AAGGTCAACG GCAAGGCAGA GGATCTCACC
TGGGAAATCT TCCGCGACAC GCTGATCGAG CAGGCCGAGC AAGGCGTCGA CTACTTCACG
ATCCATGCGG GCGTGCGGCT GCAGTACGTG CCGCTCACCG CGAACCGGAT GACGGGCATC
GTGTCGCGCG GCGGCTCGAT CATGGCGAAG TGGTGCCTCG CGCATCACAA GGAAAGCTTC
CTGTACGAAC ACTTCGAAGA GATCTGCGAG ATCATGAAGG CGTACGACGT GAGCTTCTCG
CTCGGCGACG GCCTGCGCCC CGGCTCGATC TACGACGCGA ACGACGAAGC GCAGCTCGGC
GAACTGAAGA CGCTCGGCGA GCTCACGCAG ATCGCATGGA AGCACGACGT GCAGGTGATG
ATCGAAGGCC CCGGCCACGT GCCGATGCAG CTGATCAAGG AGAACATGGA TCTCCAGCTC
GACTGGTGCA AGGAAGCGCC GTTCTACACG CTCGGGCCGC TGACCACCGA CATCGCACCG
GGCTACGACC ACATCACGTC GGGCATCGGC GCCGCGATGA TCGGCTGGTT CGGCACCGCG
ATGCTGTGCT ACGTGACGCC GAAGGAACAC CTCGGACTGC CGAACAAGGA CGACGTGAAG
GAAGGCATCA TCACGTACAA GCTCGCCGCG CACGCGGCCG ACCTCGCCAA GGGTCACCCC
GGCGCGCAGG TGCGCGACAA CGCGCTGTCG AAGGCGCGTT TCGAGTTCCG CTGGGAAGAC
CAGTTCAACA TCGGTCTCGA TCCGGACAAG GCGCGCGAAT TCCACGACGA GACGCTGCCG
AAGGATTCGG CTAAGGTCGC CCACTTCTGC TCGATGTGCG GCCCGCACTT CTGCTCGATG
AAGATCACGC AGGACGTGCG CGAGTTCGCC GCGCAGCAGG GCGTGTCGGA AACCGAGGCG
CTGAAGAAGG GGATGGAAGT CAAGGCGGTC GAGTTCGTGA AGACCGGCGC CGAGATCTAT
CACCGTCAGT AA
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| Protein sequence | MNANPKFLSA DAHVDAAAVA PLPNSRKVYV TGSQPDIRVP MREITQADTP TGFGGEKNPP
IYVYDTSGPY TDPDAKIDIR AGLPALRQGW IEARGDTEVL DGLSSQYGLE RAADPATADL
RFPGLHRNPR RAQPGKNVTQ MHYARQGIIT PEMEYIAIRE NQRRAEYIES LKSSGPNGAK
LAAMMGRQHP GQAFGAAAFG ANALAEITPE FVRDEVARGR AIIPANINHP ESEPMIIGRN
FLVKINANIG NSAVTSSIGE EVDKMTWAIR WGGDTVMDLS TGKHIHETRE WIIRNSPVPI
GTVPIYQALE KVNGKAEDLT WEIFRDTLIE QAEQGVDYFT IHAGVRLQYV PLTANRMTGI
VSRGGSIMAK WCLAHHKESF LYEHFEEICE IMKAYDVSFS LGDGLRPGSI YDANDEAQLG
ELKTLGELTQ IAWKHDVQVM IEGPGHVPMQ LIKENMDLQL DWCKEAPFYT LGPLTTDIAP
GYDHITSGIG AAMIGWFGTA MLCYVTPKEH LGLPNKDDVK EGIITYKLAA HAADLAKGHP
GAQVRDNALS KARFEFRWED QFNIGLDPDK AREFHDETLP KDSAKVAHFC SMCGPHFCSM
KITQDVREFA AQQGVSETEA LKKGMEVKAV EFVKTGAEIY HRQ
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