Gene BamMC406_1091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1091 
Symbol 
ID6179002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1195565 
End bp1196338 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content72% 
IMG OID641680847 
ProductABC transporter related 
Protein accessionYP_001807798 
Protein GI172060146 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTGC TCGAACTCGA CGACCTCTGC GTCGCCTACG ACACGCCGCA CGGCCGCCGC 
ACGGTGGTCG ACGGGCTGAG CCTCGCACTG CCGCGCGGCG ACATCGGCTG CCTGCTCGGC
GCCTCGGGCT GCGGCAAGAC CACGGTGCTG CGCGCGATCG CGGGCTTCGA GCCGGTGCGC
ATGGGGCGCA TCGTGCTGGA CGGCACGCCC GTCGCGGCGC CGTCGCTCGA CGTGCCGCCC
GAGCGGCGAC GCATCGGGAT GATGTTCCAG GACTATGCGC TGTTCCCGCA CCTGAGCACG
GCCGACAACG TCGCGTTCGG CCTGCGGCGC ATGTCGAAGG CCGAGCAGCG CAGCCGCGTC
GCGGACATGC TCGAACTCGT CGGTCTCGCC GATGCGGGCA GCGCGTATCC GCACGAACTG
TCGGGCGGCC AGCAGCAGCG CGTCGCCCTC GCCCGCGCGC TCGCGCCGTC GCCGGAGCTG
CTGCTGCTCG ACGAGCCGTT CTCGAATCTC GACGTCGATA CGCGCGAGCG CCTCGCGTTC
GAGCTGCGCG ACATCCTGAA GCGCACGGGT CACACCGCGA TCCTCGTCAC GCACAACCAG
GCGGAAGCGT TCGCGATCGC CGACCGGATC GGCGTGATGA AGGATGGCCG GCTCGCGCAA
TGGGACACGC CGTACGCGCT GCACCATCAT CCGGCCAGCC CCTTCGTCGC GGAATTCGTG
CGCAGCGACG CGCTGGCGGA CGAACGCGCC CGGGCGCTGG CGCGCGGCCG CTGA
 
Protein sequence
MNLLELDDLC VAYDTPHGRR TVVDGLSLAL PRGDIGCLLG ASGCGKTTVL RAIAGFEPVR 
MGRIVLDGTP VAAPSLDVPP ERRRIGMMFQ DYALFPHLST ADNVAFGLRR MSKAEQRSRV
ADMLELVGLA DAGSAYPHEL SGGQQQRVAL ARALAPSPEL LLLDEPFSNL DVDTRERLAF
ELRDILKRTG HTAILVTHNQ AEAFAIADRI GVMKDGRLAQ WDTPYALHHH PASPFVAEFV
RSDALADERA RALARGR