Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1091 |
Symbol | |
ID | 6179002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1195565 |
End bp | 1196338 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641680847 |
Product | ABC transporter related |
Protein accession | YP_001807798 |
Protein GI | 172060146 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCTGC TCGAACTCGA CGACCTCTGC GTCGCCTACG ACACGCCGCA CGGCCGCCGC ACGGTGGTCG ACGGGCTGAG CCTCGCACTG CCGCGCGGCG ACATCGGCTG CCTGCTCGGC GCCTCGGGCT GCGGCAAGAC CACGGTGCTG CGCGCGATCG CGGGCTTCGA GCCGGTGCGC ATGGGGCGCA TCGTGCTGGA CGGCACGCCC GTCGCGGCGC CGTCGCTCGA CGTGCCGCCC GAGCGGCGAC GCATCGGGAT GATGTTCCAG GACTATGCGC TGTTCCCGCA CCTGAGCACG GCCGACAACG TCGCGTTCGG CCTGCGGCGC ATGTCGAAGG CCGAGCAGCG CAGCCGCGTC GCGGACATGC TCGAACTCGT CGGTCTCGCC GATGCGGGCA GCGCGTATCC GCACGAACTG TCGGGCGGCC AGCAGCAGCG CGTCGCCCTC GCCCGCGCGC TCGCGCCGTC GCCGGAGCTG CTGCTGCTCG ACGAGCCGTT CTCGAATCTC GACGTCGATA CGCGCGAGCG CCTCGCGTTC GAGCTGCGCG ACATCCTGAA GCGCACGGGT CACACCGCGA TCCTCGTCAC GCACAACCAG GCGGAAGCGT TCGCGATCGC CGACCGGATC GGCGTGATGA AGGATGGCCG GCTCGCGCAA TGGGACACGC CGTACGCGCT GCACCATCAT CCGGCCAGCC CCTTCGTCGC GGAATTCGTG CGCAGCGACG CGCTGGCGGA CGAACGCGCC CGGGCGCTGG CGCGCGGCCG CTGA
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Protein sequence | MNLLELDDLC VAYDTPHGRR TVVDGLSLAL PRGDIGCLLG ASGCGKTTVL RAIAGFEPVR MGRIVLDGTP VAAPSLDVPP ERRRIGMMFQ DYALFPHLST ADNVAFGLRR MSKAEQRSRV ADMLELVGLA DAGSAYPHEL SGGQQQRVAL ARALAPSPEL LLLDEPFSNL DVDTRERLAF ELRDILKRTG HTAILVTHNQ AEAFAIADRI GVMKDGRLAQ WDTPYALHHH PASPFVAEFV RSDALADERA RALARGR
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