Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1084 |
Symbol | |
ID | 6177106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1188865 |
End bp | 1190820 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641680840 |
Product | phosphatase-like protein |
Protein accession | YP_001807791 |
Protein GI | 172060139 |
COG category | [R] General function prediction only |
COG ID | [COG3211] Predicted phosphatase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCGT TGCCCAATGC TTCCCGTCGT CAGGCCCTGA AGATCCTCGC CGGCGCGCCC ATGCTGCCCC TCTCCGGCCT CGCGCTGCCG GCTCTCCTGA CCGGTTGCGG TGGCGACGAC AATCCGACGG CGACGCCGGC CGCCGCATAC ACGTCGGCGG CGTTCTCGGC GATGGCCGCG CCCTCGCTCG ACAACGCGGC CGCGATGGCC ACGACGACGG TCGGCTCGAC GCTGTCGGTG TCGTTCTCGG ACGGCTCGTC GCGCAACTTC AAGCTGGCGT ACCGGCCGTT CTTCGTGACG GGCGACATGG TGCCGGACGG CAAGGGCGGC ACGACGCTCG CGGGCGGCTA CTACGACATC AACAACCAGC CGATCATCGA CCGCTCGGTG GCCGGCAAGG AGCGCCAGTT CTATTCGGAC TGCCCGGACG GCAGCTCGCT GCTGACGCTG AAGAACGCGA ACGTCGCCGG CGTGAAGGGC AACACGGTGT TCGCGGTCGT GCAGTTCGAA TACACGACGC GCGACCAGGC GAGCACATCG CAGTACGGCC AGCTGCCGTC GCCGATCGCG GTGATCACGC TCGATCAGGA TCCGTCCAGC GGTGCGCTGA AGGTCGTCAA GTACCACAAC GTCGACACGT CGAGCGCGCA CGGCCTGTGG ATCACCTGCG GCGCGAGCCT GTCGCCGTGG GGCACGCACC TGTCGAGCGA GGAATACGAG CCGGACGCGA CGAAGGCCGC GACCGACGCG CAGTTCAAGG CATTCAGCAA GAACACGTTC GGCGACGAGA CGAAGGCGAA CCCCTATCAC TACGGCCACC TGCCCGAGAT CACGGTGAAC CCGGACGGCA CCGGCACGGT GAAGAAGCAC TACTGCCTCG GCCGCATCTC GCACGAGCTG ATCCAGGTGA TGCCGGACCA GCGCACCGTG ATGATGGGTG ACGACGCCAC CAACGGCGGC CTGTTCATGT TCGTCGCCGA CAAGGCGGCC GACCTGTCGG CCGGCACGCT GTACGTCGCG AAGTGGACGC AGACGTCGTC GGCCGGCGCA GGCAGCGCAA CGCTGACGTG GATCAGGATC GGCCACGCGA CGAGCAGCGA GATCGAGACG CTCGCGAACA CGCTGAAGGC GTCGGACATC ATGGACCTGA CGACGACCGA CCCGAACGAC GCGAGCTACA CGAAGATCCA CTTCGGCGGC AAGTTCAACT GGATGCGCGT GAAACCGGGG ATGGAAAAGG CGGCCGCATT CCTCGAGACG CACCGCTATG CGGCGCTAAT CGGCGGCAGC ATGGCGTTCA CGAAGCTCGA AGGCACGACG GTGAACGCGA AGGACAAGAT CGTCTACACG GCGATGTCGC GGATCGAGAC GTCGATGGTC AAGGGCAACG CGGTGTCGCG CGACGTCGCG GTGGACAAGA AGATCGCCGC GGGCGCCGTC TATGCGCTGA ACCTGAAGGC CGGCCAGCGC GACACGTCGG GCGGCGCGAT CGACAGCGAA TGGGTGCCGG TCGACATGGC TGCGCCGGCT GCGCTCGTCG GCGAGGACCT CGCCGCGGCC GACGCGCTCG GCAACCTCGC GAACCCGGAC AAGATCGCGA ACCCCGACAA CCTGAAGTTC TCCGAAAAGC TGCGCACGCT CTTCATCGGC GAAGACTCGG GCATGCACGT CAACAACTTC CTGTGGGCGT ACAACGTCGA CACGAAGTCG CTCGCACGCG TGCTGTCGTG CCCGGCCGGC GCCGAATCGA CGGGCCTGCA CGCGGTCGAC GAGATCAACG GCTGGACCTA CGTCATGAGC AACTTCCAGC ACGTGGGCGA CTGGGAGACG CCGCTGCACG ACAAGGTCAA GTCGACGCTC GACCCGCTCG TACGCGCCAA CTACAAGGAC CGCTTCGGCG CCTGCGTCGG CTACCTGATG GCCGAACCGA CCAGCATCAA GCTCGCGAAG GCCTGA
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Protein sequence | MPALPNASRR QALKILAGAP MLPLSGLALP ALLTGCGGDD NPTATPAAAY TSAAFSAMAA PSLDNAAAMA TTTVGSTLSV SFSDGSSRNF KLAYRPFFVT GDMVPDGKGG TTLAGGYYDI NNQPIIDRSV AGKERQFYSD CPDGSSLLTL KNANVAGVKG NTVFAVVQFE YTTRDQASTS QYGQLPSPIA VITLDQDPSS GALKVVKYHN VDTSSAHGLW ITCGASLSPW GTHLSSEEYE PDATKAATDA QFKAFSKNTF GDETKANPYH YGHLPEITVN PDGTGTVKKH YCLGRISHEL IQVMPDQRTV MMGDDATNGG LFMFVADKAA DLSAGTLYVA KWTQTSSAGA GSATLTWIRI GHATSSEIET LANTLKASDI MDLTTTDPND ASYTKIHFGG KFNWMRVKPG MEKAAAFLET HRYAALIGGS MAFTKLEGTT VNAKDKIVYT AMSRIETSMV KGNAVSRDVA VDKKIAAGAV YALNLKAGQR DTSGGAIDSE WVPVDMAAPA ALVGEDLAAA DALGNLANPD KIANPDNLKF SEKLRTLFIG EDSGMHVNNF LWAYNVDTKS LARVLSCPAG AESTGLHAVD EINGWTYVMS NFQHVGDWET PLHDKVKSTL DPLVRANYKD RFGACVGYLM AEPTSIKLAK A
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