| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1079 |
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| Symbol | |
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| ID | 6177874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1180305 |
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| End bp | 1183424 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641680835 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001807786 |
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| Protein GI | 172060134 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0757795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAT CCCGCCTCTT CATTCTCCGG CCGGTCGGCA CCGCCCTCCT GATGGCGGCG
ATCATGCTGG CCGGTCTCGT CGCGCTGCGC TTCCTGCCGC TCGCCGCGCT GCCCGAAGTC
GACTACCCGA CGATCCAGGT TCAGACCTTC TACCCGGGCG CGAGCCCGGA GGTGATGACG
TCGTCGGTCA CGGCGCCGCT CGAGCGGCAA TTCGGGCAGA TGCCGTCGCT GAACCAGATG
TCGTCGCAAA GCTCGGCCGG CGCGTCGGTG ATCACGCTGC AGTTCTCGCT CGACCTGCCG
CTCGACATCG CCGAGCAGGA AGTCCAGGCC GCGATCAACG CGGCCGGCAA CCTGCTGCCG
TCCGACCTCC CGGCCCCGCC GATCTACGCG AAGGTCAATC CGGCCGACGC GCCGGTGCTG
ACGCTCGCCA TCACGTCGAA GACCTTGCCG CTCACGCAGG TGCAGGACCT GACCGATACG
CGCCTCGCGA TGAAGATCTC GCAGATCGCC GGCGTCGGCC TCGTCAGCCT GTCGGGCGGC
AACCGGCCGG CCGTGCGGAT CCAGGCAAAC CCGACCGCGC TCGCGCAGTA CGGGATGAAC
CTCGACGACC TGCGCACGAC GATCTCGAAC CTGAACGTGA ACACGCCGAA GGGGAACTTC
GACGGCCCGA CGCGCGCGTA CACGATCAAC GCCAACGACC AGCTCACCAG CGCCGACCAG
TACAACTCCG CGGTCGTCGC GTACAAGAGC GGCCGCCCGG TGATGCTGAC CGACGTCGCG
AAGGTGGTCG CCGGCTCGGA GAACACCAAG CTCGGCGCGT GGGTGAACGC GGAGCCCGCG
ATCATCCTGA ACGTGCAGCG CCAGCCGGGC GCGAACGTGA TCGCGACCGT CGACGCGATC
AAGGCGCAGT TGCCGAAGCT GCAGGAGACG CTGCCCGCGG CGCTCGACGT GCAGATCGTC
ACCGACCGCA CTACGATGAT CCGCGCCGCC GTGCGCGACG TGCAGTTCGA GCTGCTGCTC
GCGGTCGCGC TGGTCGTGCT GGTGATGTAC CTGTTTCTCG CGAACGTCTA CGCGACGATC
ATCCCGAGCC TGTCGGTGCC GCTGTCGCTG ATCGGCACGC TCGCGGTGAT GTACCTGGCA
GGCTTCTCGC TGAACAACCT GTCGCTGATG GCGCTCACCA TCGCGACCGG CTTCGTCGTC
GACGACGCGA TCGTGATGAT CGAGAACATC GCACGCTACG TCGAGGAAGG CCACACGGGC
CTCGAGGCGG CGCTGAAGGG CTCGAGGCAG ATCGGCTTCA CGATCATCTC GCTGACGGTG
TCGCTGATCG CGGTGCTGAT CCCGCTGCTG TTCATGGGCG ACGTGGTAGG CCGCCTGTTC
CACGAATTCG CGATCACGCT CGCGGTGACG ATCGTGATCT CGGCGATCGT GTCGCTCACG
CTCGTGCCGA TGATGTGCGC GAAGCTGCTG CGCCATTCGC CGCCGCCGGA AAGCCACCGC
TTCGAGGCGC GCGTGCACCG CGTGATCGAC CGGGTGATCG CGCGCTACGG GGTCGCGCTC
GAATGGGTGC TGAACCGCCA GGGCTCGACG CTCGTCGTCG CGCTGCTCAC GCTCGCGCTG
ACCGCCCTGC TCTACGTATA CGTGCCGAAG GGCTTCTTCC CCGCGCAGGA TACCGGCGTG
ATCCAGGCGA TCACGCAGGC GCCGCAGTCG ATCTCGTACG GCGCGATGGC CGAACGCCAG
CAGGCGCTCG CGGCCGAGAT CCTGAAGGAT CCGAACGTCG AGAGCCTCAC GTCGTTCATC
GGCGTCGACG GCAGCAACAT CACGCTGAAC AGCGGCCGGA TGCTGATCAA CCTGAAGGCG
CGCGACCACC GCTCCGAGTC GTCCGCGCAG ATCATCCGCG ACCTGCAGCA GCGCGTCGCG
AACGTGACCG GCATCACGCT GTTCATGCAG TCGGTGCAGG ATCTGACGAT CGACTCCACC
GTGAGCCCGA CGCAGTACCA GTTCATGCTG ACGAGCCCGA ACCCCGACGA GTTCGCGACC
TGGGTGCCGA AGCTCGTCAC GCGGCTGCAG AAGGAGCCGT CGCTCGCCGA CGTCGCGACC
GACCTGCAGA GCAATGGCCA GTCGGTGTAC ATCGAGATCG ACCGCGCCAG CGCCGCGCGC
TTCGGCATCA CGCCGGCGAC CGTCGACAAC GCGCTGTACG ACGCGTTCGG CCAGCGCATC
GTGTCGACGA TCTTCACGCA GTCGAACCAG TACCGCGTGA TTCTCGAGTC GGAGCCGAAG
GAGCAGCATT ACGCCGAATC GCTGAACGAC ATCTACCTGC CGTCCGCCGG CGGCGGCCAG
GTGCCGCTGT CGTCGATCGC GTCGTTCCAT GAACGGCCGT CGCCGCTGCT GATCGCGCAC
CTGTCGCAGT TTCCGTCGAC GACGATCTCG TTCAACCTCG CGCCGGGCGC GTCGCTCGGC
GAGGCCGTGA AGGCGATCGG CGCCGCCGAG AAGGACATCG GCCTGCCCGG CTCGTTCCAG
ACGCGCTTCC AGGGCGCGGC GCTCGCGTTC CAGGCGTCGC TGTCGAACCA GCTGTTCCTG
ATCCTCGCGG CGGTCGTCAC GATGTACATC GTGCTCGGCG TGCTGTACGA GAGCTACATC
CACCCGATCA CGATCCTGTC GACGCTGCCG TCGGCCGGCG TCGGCGCGCT GCTCGCGCTG
ATGATCACCG GGCACGACCT CGACATCATC GGGATCATCG GGATCGTGCT GCTGATCGGC
ATCGTGAAGA AGAACGCGAT CATGATGATC GACTTCGCGC TCGAGGCCGA ACGGGTCGAA
GGCAAGCCGC CGCGCGAGGC GATCTACCAG GCGTGCCTGC TGCGCTTCCG GCCGATCCTG
ATGACGACGC TCGCCGCACT GCTCGGCGCG GTGCCGCTGA TCGTCGGCGC GGGCGCGGGC
TCCGAGCTGC GCCAGCCGCT CGGGATCGCG ATCGCCGGCG GCCTGATCGT GTCGCAGGTG
CTGACGCTGT TCACGACGCC GGTGATCTAT CTCGGCTTCG ACAGCCTCGC GCGCCGCGCG
CGCGGCTGGT TCGAGCGGTA CGGCCCCGGC GCCGATTCCG GCAAGCACAC GGGTGCCTAA
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| Protein sequence | MNPSRLFILR PVGTALLMAA IMLAGLVALR FLPLAALPEV DYPTIQVQTF YPGASPEVMT
SSVTAPLERQ FGQMPSLNQM SSQSSAGASV ITLQFSLDLP LDIAEQEVQA AINAAGNLLP
SDLPAPPIYA KVNPADAPVL TLAITSKTLP LTQVQDLTDT RLAMKISQIA GVGLVSLSGG
NRPAVRIQAN PTALAQYGMN LDDLRTTISN LNVNTPKGNF DGPTRAYTIN ANDQLTSADQ
YNSAVVAYKS GRPVMLTDVA KVVAGSENTK LGAWVNAEPA IILNVQRQPG ANVIATVDAI
KAQLPKLQET LPAALDVQIV TDRTTMIRAA VRDVQFELLL AVALVVLVMY LFLANVYATI
IPSLSVPLSL IGTLAVMYLA GFSLNNLSLM ALTIATGFVV DDAIVMIENI ARYVEEGHTG
LEAALKGSRQ IGFTIISLTV SLIAVLIPLL FMGDVVGRLF HEFAITLAVT IVISAIVSLT
LVPMMCAKLL RHSPPPESHR FEARVHRVID RVIARYGVAL EWVLNRQGST LVVALLTLAL
TALLYVYVPK GFFPAQDTGV IQAITQAPQS ISYGAMAERQ QALAAEILKD PNVESLTSFI
GVDGSNITLN SGRMLINLKA RDHRSESSAQ IIRDLQQRVA NVTGITLFMQ SVQDLTIDST
VSPTQYQFML TSPNPDEFAT WVPKLVTRLQ KEPSLADVAT DLQSNGQSVY IEIDRASAAR
FGITPATVDN ALYDAFGQRI VSTIFTQSNQ YRVILESEPK EQHYAESLND IYLPSAGGGQ
VPLSSIASFH ERPSPLLIAH LSQFPSTTIS FNLAPGASLG EAVKAIGAAE KDIGLPGSFQ
TRFQGAALAF QASLSNQLFL ILAAVVTMYI VLGVLYESYI HPITILSTLP SAGVGALLAL
MITGHDLDII GIIGIVLLIG IVKKNAIMMI DFALEAERVE GKPPREAIYQ ACLLRFRPIL
MTTLAALLGA VPLIVGAGAG SELRQPLGIA IAGGLIVSQV LTLFTTPVIY LGFDSLARRA
RGWFERYGPG ADSGKHTGA
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