Gene BamMC406_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1062 
Symbol 
ID6176700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1157391 
End bp1158452 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content69% 
IMG OID641680818 
Productarginine/ornithine succinyltransferase, alpha subunit 
Protein accessionYP_001807769 
Protein GI172060117 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3138] Arginine/ornithine N-succinyltransferase beta subunit 
TIGRFAM ID[TIGR03243] arginine and ornithine succinyltransferase subunits
[TIGR03245] arginine/ornithine succinyltransferase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0200119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATTTG TTCGCCCCGG CAAACTCACG GATCTGGATG CGCTCGCGCA CATGGCGCGC 
ACCGCGCAGC CGGTCCTGCA CTCGCTGCCG CATGACCGCG CGGCGCTCGA AGCGCGCGTG
GCGCTCTCCG AGGATTCGTT TCGCGCGGAC GTCGACTTCG CCGGCGAAGA GTTCTACCTC
TTCGTGCTGG AAGACTCGTC GACGGGCAAG CTGCTCGGCA CGGCGAGCGT CGTGGCCGCG
GCCGGCTACT CGGAACCGTT CTACGCGTTC CGCAACGACG CCCTGATCCA CGCGTCGCGC
GAGCTGCACG TGAACCGCAA GATCCACGCG CTCACGATGT CGCACGAGCT GACCGGCAAG
AGCCGGCTGG CGGGCTTCTA CGTCGATCCG TCGCTGCGCG GCGACGCGGC CGCGCACCTG
ATCTCGCGTG CGCGGATGAT GTACATCGCC GCGAACCGCC GCCGCTTCAC GCCGGAAGTA
TTCACGCTGC TGCTCGGCGT GAGCGACAAC ACCGGAGCAT CGCCGTTCTG GGAAGCAGTG
GGCCGCAAGT TCTTCGGGCG CGACTTCACC GACGTCGACA TCGCGTCGGG CGGCCGCAGC
CGCACGTTCA TCGCGGAAGT GATGCCGGCC TATCCGCTCT ACGTGCCGCT GCTGCCGGAA
GCCGCGCAGC GCGTGCTCGG CGAGCCGAAC GAAACGGCGC TGCTCGCGTA CGACATCCAT
CTCGAGGAAG GCTTCGAGCC GGACCGCTTC GTCGACATTT TCGACGCGGG CCCCGTGCTG
ACCGCGCAGG TCGACCGCAC CGCATGCGTG AAGCACGCGG CGGAGCGCAC CGTGCGCGAA
GCCGCGCGGC AGCAGGGCGA CGCCGCGTAC ATGGTGTCGA CGGGCAGCGG CGAATCGTTC
CGCTGCGTGC TGGCCGACCT GCCGGACGAC GATGCGCACC GCGACGTGGC GCCGCTGTCG
GGCGACGTGC GCGCGGCGCT CGATGTGAAG GATGGCGATG TCGTGCGCTG CGTGCCGCTG
CACCGCCGCG ACGATGAAGA AACGAAGGGA GGCGCAGCAT GA
 
Protein sequence
MLFVRPGKLT DLDALAHMAR TAQPVLHSLP HDRAALEARV ALSEDSFRAD VDFAGEEFYL 
FVLEDSSTGK LLGTASVVAA AGYSEPFYAF RNDALIHASR ELHVNRKIHA LTMSHELTGK
SRLAGFYVDP SLRGDAAAHL ISRARMMYIA ANRRRFTPEV FTLLLGVSDN TGASPFWEAV
GRKFFGRDFT DVDIASGGRS RTFIAEVMPA YPLYVPLLPE AAQRVLGEPN ETALLAYDIH
LEEGFEPDRF VDIFDAGPVL TAQVDRTACV KHAAERTVRE AARQQGDAAY MVSTGSGESF
RCVLADLPDD DAHRDVAPLS GDVRAALDVK DGDVVRCVPL HRRDDEETKG GAA