| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0713 |
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| Symbol | |
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| ID | 6178263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 796063 |
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| End bp | 796866 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641680461 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001807425 |
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| Protein GI | 172059773 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.368444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCGC CCAACATTCC CGAGCTGGTC GTCCGTGCCG GGCAACTACC GTATCTGCGG
GAACACCTTG CGCTCGCCGA GGGCGGCACC GCGTGCGCGA ATCTGCCGGA GCGCACGCTC
GCGAGCGCCT ACGAACCCAT CTACGACGTG ACGATGCCTG GCGCACCGCA GTCGACGTCG
TTCACGGATG CGATCGAGCG CTACGGCGAC GAGCTCGGCT TCCAGGCCGT CACGCTGGTC
ACGGGCGCCC CGCACGACCC GGTCGACTCG GCCGTCGACG ACCAGGCGCT CGTCGCGATC
GACCGGCTGT CGCGCGCGCT GCACGCGATC AATTTCTTCG GCGCGCAACG CCACGGGCTG
CTGTTCCTGC GCGTGCACGA GCGGTTGCTC AAGAGCGTGA AGTACGACCA CGGCAAGCAT
TTCTCGTCGG TGCTGCAGCG CTTCGGGCTG CCGACCGAGC GGATCGTGAT CGAGCTGCCG
GCGGTCGCGG TCGCGCACAA GACCTTCCTC GGCTACCTGA CGCGCAGCTA CCAGCATCAC
GGCTTCAAGG TCGCGGACAA GCTGCCCGAC CCGGGCCGGA TCCTCGCGGT CGAATCGGAC
ATGGCGCGGC CCGACTACAT CAAGATGGAC GCGGGCATCG CGCTGCGCGA CGGGATGGTG
AAGGCGCTGG TCGCGTATGC GCAGCGCGTG CGGATTCCGT TGATTTTCGA CGGCGTCGTC
GACGAGACGC AGTGCGAGCT GCTGCGCCAG CACGACGTGC GGTTCATGCA GGGGCCGGTG
TTCGCTAAGG TCGTCACGGC CTGA
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| Protein sequence | MIPPNIPELV VRAGQLPYLR EHLALAEGGT ACANLPERTL ASAYEPIYDV TMPGAPQSTS
FTDAIERYGD ELGFQAVTLV TGAPHDPVDS AVDDQALVAI DRLSRALHAI NFFGAQRHGL
LFLRVHERLL KSVKYDHGKH FSSVLQRFGL PTERIVIELP AVAVAHKTFL GYLTRSYQHH
GFKVADKLPD PGRILAVESD MARPDYIKMD AGIALRDGMV KALVAYAQRV RIPLIFDGVV
DETQCELLRQ HDVRFMQGPV FAKVVTA
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