| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0704 |
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| Symbol | |
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| ID | 6178195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 789263 |
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| End bp | 790102 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641680452 |
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| Product | prepilin-type cleavage/methylation-like protein |
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| Protein accession | YP_001807416 |
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| Protein GI | 172059764 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.978225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTGA ACGCTGATCG CCGCAGCCGC GCGCATACGC TGCTCGAAGT GCTGATCGCG
ATGATCGTCG GTCTGCTCGT GCTTGCCGCG GCCGGTGCGC TGTATCACGC GCAGCGCGTT
GCGCAGCGGC GGGCGGAAGA CGGATTCCGG ATGCGCGATG CGGCCGCGAC CGCATTGATG
CTGATCGGCC AGCAGATCCA GATGGCCGGG TTTCGGCCGC TCGATGTCGA AGGCGCGTCG
TCGTTGCCGC CGGTGTTCGG CTGTTCCTCG GGCCGCGTGC GAGGCGATGG CGCGCAGGTG
CGCTGCGAAC CCGTGCGCGC GGCGTCGGAT GCGGTGCTGG TGCGGTATGT CGGCGATCCC
GTATCGACGT GGCCGACCAG CAGCGCACAG GTGTCGGATT GTCTCGGGCA GGGTGTCGGC
GCCCCGGGTG AGCGGCCACT GGTGGAAAAC CGTTTCGACG CGCGTGTCAG CCCGTCGACG
GGCGAACCCG AACTGTACTG CGAGGGAAGC GGGCGTCCGG GCACGCCGCA ACCCGTCGTG
TCCGGGATCG ACCAACTGCG CGTGCGTTAC CTGCGTCGCG ACGGCGCGCA GTTCGTCGAC
GCGCAGGCAA TGGACGCCCA CGACTGGCGC GATGTCGTCG CCGTGCATGT GTGCGTGCGG
GCGCGTGGCG AACCGATGCC CGAGGCCGCG CGTCATGTCG ATTGCGACGG CCGCGCGGCC
GTTGCGTCGG ATGGTCGCGC GCATCTGGTG CTGCATCGAA TCGTCGCGGT GCGAAATTCC
GCGGTCGCAT TCGCCGATCC TGCCCGGGAC GCGGCGCGAG GCCACGAGGC GTTGCGATGA
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| Protein sequence | MPLNADRRSR AHTLLEVLIA MIVGLLVLAA AGALYHAQRV AQRRAEDGFR MRDAAATALM
LIGQQIQMAG FRPLDVEGAS SLPPVFGCSS GRVRGDGAQV RCEPVRAASD AVLVRYVGDP
VSTWPTSSAQ VSDCLGQGVG APGERPLVEN RFDARVSPST GEPELYCEGS GRPGTPQPVV
SGIDQLRVRY LRRDGAQFVD AQAMDAHDWR DVVAVHVCVR ARGEPMPEAA RHVDCDGRAA
VASDGRAHLV LHRIVAVRNS AVAFADPARD AARGHEALR
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