| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0586 |
|---|
| Symbol | |
|---|
| ID | 6177290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 658036 |
|---|
| End bp | 659457 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641680334 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001807299 |
|---|
| Protein GI | 172059647 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.53707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.674702 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCT ACAACAAACC CCTGATCCAG GGCGAATCGC GTTTCGACCA GACGCAACTG
AACATCGAAA AGGACAACTG GAACTGGTGC GAGCCGTCCC GCTACGACGG CGAGCGTCCG
GCCAACTGGT ACGAGGCGTC GCTGTCGCGC CATGAAAACA GTGCGCCGCT CGCGCACGAC
GCCGTGTGCG ACGTGCTGGT GATCGGCTCG GGTCTGCTCG GCGCATCGGC CGCGCTGCAT
CTCGCGGAAG CGGGGGTCGA CACGATCCTC GTCGACAAGC ATCACGTCGG CTCCGCGGCG
TCGGGCCGCA ACGGCGGCCA GCTCACGCCG GGCCTCGCGC GCTGGGAAGC CGCCGACATG
ATCGACTACC TGTCGCACGA CGACGCGAAG CGGCTGTGGC GCATCGCGTC GACCGAATCG
ATGGACCTGA TCGATGAAAT CGGCGCGCGT TACGCGCTCG ACCTCGATCG CAAGAACGGC
CACGTGACGG CGGCGGTCCA CCCGGGCCAC ATGAGCGCGC TGCTCGACGG CGCGGACGCC
CGCCGCCATC TCGGCGACGC CGGCGTGACG CTGGTCGGCC GCCATCAGCT GCACGACGAA
TACGTGCGCT CGGGCCTGTA TCACGGCGCG GCGATCGACG CGCTCGGCGG GCAGCTTCAT
CCGCTCGCGC TGGTGCGCGG CCTCGTGCAT GGCTTCCAGT TGAACGGCGG CGCGCTGTAC
GAGGGCACCG AGGTGCTCGA GCTCGACGAA ACGCCCGCGG GCGTCGTCGC GACGACGCCG
GGCGGCACGA TCACCGCGCG TCGCGGCGTC GTGCTCGCGC TGCACAACAC GACGTTCCGG
CTGCTGGATG ACGGCGGCGC GACCACCGTG CCGTTCTTCA CGTACGTGAG CGTGACGGCG
CCGCTCGACG TCGATGTCGC GACGCTGATG CCGGCCGGCA TGCCGGTGTA CGACACGCAG
TTCCAGATCG ACTACTACCG GCCGGTGCGC GGCAACCGCC TGCTGTTCGG CGGGCAGGGC
ACCGGCTCGT GCTGGGCGCA GCAGGACGTC AACGCGTATC TGCTGACGCG GCTGAACACG
GTGTTTCCGC AGCACGACGG CCGCTTCGCG CTCGACTACT GCTGGAGCGG CGTCAGCGAC
TTCACGCTGA ACGGCGCGAC CGACAGCCGC AAGACCGACG GCCGCGTGCC GATGTACATG
GTGCAGGGCT GGAGCGGGCA CGGCGTCGCG CAGACGGTGC GGATCGGCAA GGCGATTTGC
GACGACTTCG TCGGACGCAA CGACGACTTC TCGATGCTGA CCGGCATCGA CCATCGCGAG
ATTCCGCTCG GCCGGCAGTT GTCGCCGATC GCGATTCCGG CCGCGAAAGC GGCGATGAGC
GTGATGAGCG CGCTGAATCC GGGGCGGATG ATCTCGTTCT GA
|
|---|
| Protein sequence | MTTYNKPLIQ GESRFDQTQL NIEKDNWNWC EPSRYDGERP ANWYEASLSR HENSAPLAHD
AVCDVLVIGS GLLGASAALH LAEAGVDTIL VDKHHVGSAA SGRNGGQLTP GLARWEAADM
IDYLSHDDAK RLWRIASTES MDLIDEIGAR YALDLDRKNG HVTAAVHPGH MSALLDGADA
RRHLGDAGVT LVGRHQLHDE YVRSGLYHGA AIDALGGQLH PLALVRGLVH GFQLNGGALY
EGTEVLELDE TPAGVVATTP GGTITARRGV VLALHNTTFR LLDDGGATTV PFFTYVSVTA
PLDVDVATLM PAGMPVYDTQ FQIDYYRPVR GNRLLFGGQG TGSCWAQQDV NAYLLTRLNT
VFPQHDGRFA LDYCWSGVSD FTLNGATDSR KTDGRVPMYM VQGWSGHGVA QTVRIGKAIC
DDFVGRNDDF SMLTGIDHRE IPLGRQLSPI AIPAAKAAMS VMSALNPGRM ISF
|
|---|
| |