| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0568 |
|---|
| Symbol | |
|---|
| ID | 6176604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 639640 |
|---|
| End bp | 640647 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641680316 |
|---|
| Product | allantoicase |
|---|
| Protein accession | YP_001807281 |
|---|
| Protein GI | 172059629 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG4266] Allantoicase |
|---|
| TIGRFAM ID | [TIGR02961] allantoicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.276523 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCCC CCATCCTCGA TCCGAACGCG CCGGCCTTCA CGCGGCGCTA CATGAACCTC
GCCGACCCGC GCCTGGGCGC GCAGGCGCTC TTCGCGAGCG ACGAATTCTT CGCGCCGAAG
GAGCGCATGC TCAATCCCGA GCCGGCCGTC TTCATTCCCG GCAAGTACGA CGATCACGGC
AAATGGATGG ACGGCTGGGA AACGCGCCGC AAGCGCACCA CTGGCCACGA CTTCTGCGTG
GTCCGGCTCG CGCGGCCGGG CGTGATCTAC GGCGTCGATC TCGATACGAG CCACTTCACC
GGCAACTTCC CGCCGGCTGC GTCGATCGAC GCCTGCGCGG TGGACGGTGA CACGCCGCCG
GACGACGCCG AATGGCGCAC GATCGTCCCC GCGACGACGC TGCAGGGCAA TTCGCATCAC
TATGTCGGCG TCGACGACGC GCAACCGGTC ACGCACCTGC GCGTGAACCT GTATCCGGAC
GGCGGGCTCG CGCGCCTGCG CGTGTACGGC CAGCCGCAGC GCGACTGGCG CCACGTGCCG
GCGGGCGAGC TCGTCGATCT CGCGGCGATC GAGAACGGCG GCTACCTGGT GGCCGCGAAC
AACCAGCACT TCGGCCCGGC CTCGCAGATG CTGATGCCGG GGCGCGGCGC GAACATGGGC
GACGGCTGGG AAACGCGGCG CCGCCGCGAG CCCGGCAACG ACTGGGCGAT CGTCGCGCTG
GCGCGGCCGG GCATCATCCG GCGCGTCGAG GTCGATACGG CGTTCTTCAA GGGCAACTTC
CCCGATCGCT GTTCGCTGCA GGCCGCGCGG GTCGCGGGCG GCACCGACGA CTCGCTCGTC
ACGCAGGCGA TGTTCTGGGC CGAACTGCTC GGCGAGCAGA AGCTGCAGAT GGACCACGTT
CATACGTTCG ACCAGCTCGC GGCACTCGGC CCCGTCACGC ACGTGCGCTT CAACATCTTC
CCGGACGGCG GCGTGTCGCG CTTGCGTCTG TGGGGCGAGC CGGCTTGA
|
|---|
| Protein sequence | MAAPILDPNA PAFTRRYMNL ADPRLGAQAL FASDEFFAPK ERMLNPEPAV FIPGKYDDHG
KWMDGWETRR KRTTGHDFCV VRLARPGVIY GVDLDTSHFT GNFPPAASID ACAVDGDTPP
DDAEWRTIVP ATTLQGNSHH YVGVDDAQPV THLRVNLYPD GGLARLRVYG QPQRDWRHVP
AGELVDLAAI ENGGYLVAAN NQHFGPASQM LMPGRGANMG DGWETRRRRE PGNDWAIVAL
ARPGIIRRVE VDTAFFKGNF PDRCSLQAAR VAGGTDDSLV TQAMFWAELL GEQKLQMDHV
HTFDQLAALG PVTHVRFNIF PDGGVSRLRL WGEPA
|
|---|
| |