| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0566 |
|---|
| Symbol | |
|---|
| ID | 6177007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 637246 |
|---|
| End bp | 637965 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641680314 |
|---|
| Product | GntR domain-containing protein |
|---|
| Protein accession | YP_001807279 |
|---|
| Protein GI | 172059627 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0821673 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.241322 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACG TTCCGCACAC CGTGACCGAC GCCGCCATCG CGACGATCCG CGACCGGATC
GAGGCAGGCG TCTATCCGGT CGGCAGCCTG CTGCCGGCCC AGCGCCAGCT CTCCGAAGAG
CTGGAGATCA GCCGTGCGTC GCTGCGCGAG GCGCTCTCCA CGCTCGAGGC GCTCGGGATG
CTGCGCATCC GCGCCGGCAA GGGCGTCTAT GTCGAAAGCG CGCAGGCGAG CGCCGCCCAT
CCATGGCAGT TCGCCGAACA GTCGTCGCCG CCCGACACGT ACCAGATGCG CTATGCGCTC
GAAGGGTTCG CCGCGCGCAT GGCCGCGCAC GTCGTCAGCG ACGACGACAT CGCGTGGTTC
GAGGACAACC TCGCCGACCT GCACGTGGCT CTCACCGACA GCGAGCTCGA CGAAGCGTCG
CGGCTCGACT TCGACTTCCA CATGCGGATC ATCCATCTCG CCGGCAACGC GGCGATCGAG
TCGGTGCTGC GCAGCAGCGC GGACATCATG AAGGAAAGCC AGCGCATGCC GTTCTACCGG
CGCGAGCTGC TGCTGTCGAC GTGGCACGAG CACCGCGCGA TCCTCGACGC GCTGATCGCC
CGCGATGCGG CCGCGGCCGG CCTCGCGATC GAGACGCACA TCGCGAACGC CGCGCAGCGC
GCGGGCATCT TCTTCCCGAC GCCGTCCGCC GGCACCGTCG CGGCCCTTCC CGTGAAATAA
|
|---|
| Protein sequence | MKNVPHTVTD AAIATIRDRI EAGVYPVGSL LPAQRQLSEE LEISRASLRE ALSTLEALGM
LRIRAGKGVY VESAQASAAH PWQFAEQSSP PDTYQMRYAL EGFAARMAAH VVSDDDIAWF
EDNLADLHVA LTDSELDEAS RLDFDFHMRI IHLAGNAAIE SVLRSSADIM KESQRMPFYR
RELLLSTWHE HRAILDALIA RDAAAAGLAI ETHIANAAQR AGIFFPTPSA GTVAALPVK
|
|---|
| |