| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0471 |
|---|
| Symbol | |
|---|
| ID | 6178507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 526268 |
|---|
| End bp | 527059 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641680213 |
|---|
| Product | enoyl-CoA hydratase |
|---|
| Protein accession | YP_001807184 |
|---|
| Protein GI | 172059532 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | [TIGR02280] phenylacetate degradation probable enoyl-CoA hydratase paaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0802767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATATC AGGCGATCCA GCTGGATATC GATCAGGCGG CCCGCGCGGC CACGATCACC
CTCAACCGTC CGGACAAGCT GAACAGCTTC ACGCGGGCGA TGCACCGCGA ACTGCAGGCG
GCGCTCGATG AAGTCGAGGC GGGCGGCGCG CGTGCGCTGA TCCTGACGGG TGCGGGGCGC
GGCTTCTGCG CGGGCCAGGA TCTGGCCGAC CTCGACTTCA CGCCAGGCGC GTCCACCGAC
CTTGGCACGC TGATCGACGA GCATTTCAAT CCGCTGATCC GCCGCCTGCA ACGCATGCCG
ATTCCGGTGA TCGCCGCCGT CAACGGCACG GCGGCCGGCG CCGGCGCGAA TCTCGCGCTC
GCATGCGACA TCGTATTTGC CGCGCGCTCG AGCAGTTTCA TCCAGGCCTT CGTCAAGATC
GGGCTCGTGC CCGATTCGGG CGGCACCTGG TTCCTGCCGC AACGCGTCGG CATGGCCCGC
GCGCTCGGGC TCGCCCTGAC CGGCGACAAG CTCGGCGCCG AACAGGCCGA ACAGTGGGGC
TTGATCTGGC GCGCGGTCGA CGACGACGCG CTCGCCGCGT CGGCCCGCCA GGTCGCCAAC
CAGCTCGCGC AGCAGCCGAC GCTCGCGATC GCATCGATCA AGCAGGCGAT GCGCGACAGC
ATGACGAATA CGCTCGACCA GCAGCTCGAC CTCGAGCGCG ACCTGCAGCG CAAGCTTGGC
CAGTCGGCCG ACTACGCGGA AGGCGTACAG GCGTTCATCG AGAAGCGCGC GCCGCGCTTC
GAGGGGCGTT GA
|
|---|
| Protein sequence | MSYQAIQLDI DQAARAATIT LNRPDKLNSF TRAMHRELQA ALDEVEAGGA RALILTGAGR
GFCAGQDLAD LDFTPGASTD LGTLIDEHFN PLIRRLQRMP IPVIAAVNGT AAGAGANLAL
ACDIVFAARS SSFIQAFVKI GLVPDSGGTW FLPQRVGMAR ALGLALTGDK LGAEQAEQWG
LIWRAVDDDA LAASARQVAN QLAQQPTLAI ASIKQAMRDS MTNTLDQQLD LERDLQRKLG
QSADYAEGVQ AFIEKRAPRF EGR
|
|---|
| |