| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0452 |
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| Symbol | |
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| ID | 6178377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 507496 |
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| End bp | 508887 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680194 |
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| Product | GABA permease |
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| Protein accession | YP_001807165 |
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| Protein GI | 172059513 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.131648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0220043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGAA GCAACACAGG CCTCGGCACG GGCCTGAAGC AGCGTCACGT GACGATGATG
TCGATTGCCG GCGTCATCGG CGCGGGCTTG TTCGTCGGCT CCGGCCACGC GATCGCCGAG
GCCGGCCCGG CGTCGATCCT CGCGTATGCG ATCGCGGGCG TGCTGGTCGT GCTGGTGATG
CGCATGCTCG GCGAGATGGC CGTCGCGCAT CCAGACAGCG GTTCGTTCTC GACCTATGCC
GATCGCGCGA TCGGCCACTG GGCAGGCTTC ACCATCGGCT GGCTGTACTG GTGGTTCTGG
GTGCTCGTGA TCCCGATCGA GGCGACGGCC GCCGCGACCA TTCTCAATGC GTGGTTCCCC
GGCGTCGCGA CCTGGATCTT CGCGCTCGGC ATCACGCTGC TGCTGACGAT CACCAACCTC
TTCTCGGTCA AGAACTACGG CGAATTCGAA TTCTGGTTCG CGCTGATCAA GGTCGTCGCG
ATCGTCGTGT TCCTGTGCAT CGGCGGTGCG GCGATCGTCG GCATCGTTCC TGCCCCGGCA
GTGTCGGGCG TGTCGAACCT GTTCGCGCAT GACGGCTTCA TGCCGCACGG CGCCGGCGCG
GTGCTCGCGG CGATGCTGAC GACGATGTTC TCGTTCCTCG GCACCGAGAT CGTGACGATC
GCGGCCGCCG AATCGGATAA CCCGCAACGC CAGATCGTGC GTGCGACGAA CTCGGTGATC
TGGCGGATCA CGCTGTTCTA TCTCGGCTCG ATCCTCGTCG TCGCGGCCAT CGTGCCGTGG
AATGATCCGC TGCTGCCGAA GCACGGCTCG TATCAGCGTG CGATGGAGCT GATCGGCGTG
CCGAACGCGA AGGCGATCAT CGACGTGATC GTGCTCGTGT CGGTCGCGAG CTGCCTGAAT
TCCGCGCTGT ACACCGCGTC GCGGATGCTG TTCTCGCTGT CCCGGCGCAA GGACGCGCCC
GCGTTCCTGC ACCGCACCGA TTCGACCGGC ACGCCGCGTG CGGCCGTGCT CGCATCGACG
GCGTTCGGTT TCCTGACCGT GATCGCCAAC TACCTGATGC CGGAACAGGT GTTCGGCTTC
CTGCTGGCGA CGTCGGGTGC GATCGCGCTG CTCGTGTATC TCGTGATCGC GATCTCGCAG
CTGCGGATGC GCAAGACGCT CGAATCGGGC GGCGCCGACC TGCCGCTGCG GATGTGGCTG
TTCCCGTGGC TCACGTGGGC GGTGATCCTG TTCATTTGCG GCACGCTGAC CGTGATGTTC
GTCAGCGAGG AACACCGGAT GGAAGTGGGG GCGACGGCCG TGCTGGCGTT GCTCGTGTTG
TTTGCCGCGT GGTTGAACAA GCGCGGTCGC GATGCGCGGG CCGGGGCGGG GCGGCGGGTG
TCGGCGACCT GA
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| Protein sequence | MSGSNTGLGT GLKQRHVTMM SIAGVIGAGL FVGSGHAIAE AGPASILAYA IAGVLVVLVM
RMLGEMAVAH PDSGSFSTYA DRAIGHWAGF TIGWLYWWFW VLVIPIEATA AATILNAWFP
GVATWIFALG ITLLLTITNL FSVKNYGEFE FWFALIKVVA IVVFLCIGGA AIVGIVPAPA
VSGVSNLFAH DGFMPHGAGA VLAAMLTTMF SFLGTEIVTI AAAESDNPQR QIVRATNSVI
WRITLFYLGS ILVVAAIVPW NDPLLPKHGS YQRAMELIGV PNAKAIIDVI VLVSVASCLN
SALYTASRML FSLSRRKDAP AFLHRTDSTG TPRAAVLAST AFGFLTVIAN YLMPEQVFGF
LLATSGAIAL LVYLVIAISQ LRMRKTLESG GADLPLRMWL FPWLTWAVIL FICGTLTVMF
VSEEHRMEVG ATAVLALLVL FAAWLNKRGR DARAGAGRRV SAT
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