Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0370 |
Symbol | |
ID | 6177590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 409479 |
End bp | 410237 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641680115 |
Product | cytochrome c1 |
Protein accession | YP_001807087 |
Protein GI | 172059435 |
COG category | [C] Energy production and conversion |
COG ID | [COG2857] Cytochrome c1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.46425 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC TGCTTTCGAC GCTCGCACTG ATCGGCGCGA CGGCCGTTGC GCTGCTGGCG GCGCCGGCCG TGCGCGCGGA AGGTAATTTT CCGCTCGACC GGGCGCCCGA TAACACGGAA AATCTCGTTT CGCTTCAGCA CGGCGCGCAA TTGTTTGTAA ACTATTGCCT GAACTGCCAC AGCGCGAACC TGATGCGCTA CAACCGTCTG ACGGATCTGG GCATATCCCA GAAGGAGATC GAAACGAATC TCCTGTTCAC GACCGACAAG GTCGGGAACA CGATGTCCGT CGCGATGCGG CCCGAAGACG CGAAGAACTG GCTCGGCACC ATGCCGCCCG ACCTGTCGGT CGAGGAGCGG GCGCGCGGCC GCGACTGGCT GTACACGTAT CTGCGGAGTT TCTACCGCGA CGATACGCGG CCGACCGGCT GGAACAACGC GGTGTTCGAG AACGTCGGCA TGCCCCATGT ATTGTGGCAA CTGCAGGGGC AGCGCACTGC CAAATTCGAA GACAAGACGG ACGAGGAGAC GGGCGAGAAG GTCCACACGC TCGTCGGCTT CCAGCAGGTC ACGCCGGGGA CGTTGTCGCC GCCGGACTAT GACGCTGCGG TGGCCGACCT GGTGGCCTAT ATGACATGGA TGTCCGAGCC GGCCCAGCAG ACCCGCAAAC GCCTCGGCGT GTGGGTGCTG ATCTTTCTCG GTGTCCTGAC TTTCCTGGCC TGGCGGCTCA ATGCCGCGTA CTGGAAAGAT ATCAAGTAA
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Protein sequence | MKKLLSTLAL IGATAVALLA APAVRAEGNF PLDRAPDNTE NLVSLQHGAQ LFVNYCLNCH SANLMRYNRL TDLGISQKEI ETNLLFTTDK VGNTMSVAMR PEDAKNWLGT MPPDLSVEER ARGRDWLYTY LRSFYRDDTR PTGWNNAVFE NVGMPHVLWQ LQGQRTAKFE DKTDEETGEK VHTLVGFQQV TPGTLSPPDY DAAVADLVAY MTWMSEPAQQ TRKRLGVWVL IFLGVLTFLA WRLNAAYWKD IK
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