Gene BamMC406_0370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0370 
Symbol 
ID6177590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp409479 
End bp410237 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content62% 
IMG OID641680115 
Productcytochrome c1 
Protein accessionYP_001807087 
Protein GI172059435 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.46425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC TGCTTTCGAC GCTCGCACTG ATCGGCGCGA CGGCCGTTGC GCTGCTGGCG 
GCGCCGGCCG TGCGCGCGGA AGGTAATTTT CCGCTCGACC GGGCGCCCGA TAACACGGAA
AATCTCGTTT CGCTTCAGCA CGGCGCGCAA TTGTTTGTAA ACTATTGCCT GAACTGCCAC
AGCGCGAACC TGATGCGCTA CAACCGTCTG ACGGATCTGG GCATATCCCA GAAGGAGATC
GAAACGAATC TCCTGTTCAC GACCGACAAG GTCGGGAACA CGATGTCCGT CGCGATGCGG
CCCGAAGACG CGAAGAACTG GCTCGGCACC ATGCCGCCCG ACCTGTCGGT CGAGGAGCGG
GCGCGCGGCC GCGACTGGCT GTACACGTAT CTGCGGAGTT TCTACCGCGA CGATACGCGG
CCGACCGGCT GGAACAACGC GGTGTTCGAG AACGTCGGCA TGCCCCATGT ATTGTGGCAA
CTGCAGGGGC AGCGCACTGC CAAATTCGAA GACAAGACGG ACGAGGAGAC GGGCGAGAAG
GTCCACACGC TCGTCGGCTT CCAGCAGGTC ACGCCGGGGA CGTTGTCGCC GCCGGACTAT
GACGCTGCGG TGGCCGACCT GGTGGCCTAT ATGACATGGA TGTCCGAGCC GGCCCAGCAG
ACCCGCAAAC GCCTCGGCGT GTGGGTGCTG ATCTTTCTCG GTGTCCTGAC TTTCCTGGCC
TGGCGGCTCA ATGCCGCGTA CTGGAAAGAT ATCAAGTAA
 
Protein sequence
MKKLLSTLAL IGATAVALLA APAVRAEGNF PLDRAPDNTE NLVSLQHGAQ LFVNYCLNCH 
SANLMRYNRL TDLGISQKEI ETNLLFTTDK VGNTMSVAMR PEDAKNWLGT MPPDLSVEER
ARGRDWLYTY LRSFYRDDTR PTGWNNAVFE NVGMPHVLWQ LQGQRTAKFE DKTDEETGEK
VHTLVGFQQV TPGTLSPPDY DAAVADLVAY MTWMSEPAQQ TRKRLGVWVL IFLGVLTFLA
WRLNAAYWKD IK