Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0333 |
Symbol | |
ID | 6178106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 377303 |
End bp | 378436 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641680078 |
Product | hypothetical protein |
Protein accession | YP_001807050 |
Protein GI | 172059398 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.597405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGAGC GTAATCCTTG GAAACAAACA AGCCCAACCT CGGAAGGCAA ACAACGGTCT TTGGTGCGGC GACGTCTTCT GGTTGCGTCA ACCGCACTCC CGTTTGGCTC TCTGCTAAAA CACGCAACGG CCATGGCTCA AAACAACGTT CTCCCGCCAA TCACGATCAC AACACCCAGG CCACCCGATT TCAATTTTGG TGATTTCGGC GTCAACATAA ACGGGATTCC CGGTGCCAAT CCCGGCACCG GAATTCCTGC GCCTACGGTT TGCTTCAATC AGTATTGCAC ATCGAATTTC ATGTTGCATT TTGCAAATAC AGGAAACATG ATCCGCGCTA CCGAGATGTT TCTCAAGCAT CTCGAGATCT TCGGCCGCAA TGACACAACA TTCTGGCGCA ATCAACTAAT GCTGGTAGGT GGATTCACTC CATGGCTTGC CATCGGCGGC TACAAATACT TGCCCGGCGC CAACCAGTAC GGCTTCAACT TCGAGCCAGG ACAGTTTGCC AACATTACTG CTTTATTCGG CATATACATT GGTCAGACAA AAGGCCTACC TCCGACGAGT ATGTTCGCAT CGTACGGTAA TCCATTGATG TTCGTCGAAG CAATCAATCA CTGGATACAC GGCGACGGGA CCCAACGAAC CGTCAACATT GAATCGCTTA ACTTGAAGAT GAGCGCCACC GATTTCAATG AAATAGCAAA GGCTATTGAA AATCCCGGAT ATGGCCCTGG CACCTACTCG TTCGACACAG CTTTCAGCAC AAACATCTTC AGTCACGGGA CAAAAGATCT CTGGAGTGCC TCCGTCTTTG GGAGAGTATC CGGCAGGATA CGTGGCACGC TTGTGATGCT TGAAGACGGC ACATATAGGT TTGACGGTTC CTACTCACTC AATCCCGATA GGTTCGATGC AGATCCTTCC AACCGGCCAT TCTTGCAGGA GACTGCGACG ACGTTTCTGG CCAAGCTCGG TGCCATCCTG GGACACAAGG ACTATCAAAT CAATTTTTTC GGTGAAAAGA ATCTCTCATT CTCAGGCCAA CGACCTGTCA AGAATGCAGA CATACGTCCC CCGCAGGCAG TCCATAGGCC CTCGTTCGGT GGACTGATGC GACCGCCTCG CTAG
|
Protein sequence | MTERNPWKQT SPTSEGKQRS LVRRRLLVAS TALPFGSLLK HATAMAQNNV LPPITITTPR PPDFNFGDFG VNINGIPGAN PGTGIPAPTV CFNQYCTSNF MLHFANTGNM IRATEMFLKH LEIFGRNDTT FWRNQLMLVG GFTPWLAIGG YKYLPGANQY GFNFEPGQFA NITALFGIYI GQTKGLPPTS MFASYGNPLM FVEAINHWIH GDGTQRTVNI ESLNLKMSAT DFNEIAKAIE NPGYGPGTYS FDTAFSTNIF SHGTKDLWSA SVFGRVSGRI RGTLVMLEDG TYRFDGSYSL NPDRFDADPS NRPFLQETAT TFLAKLGAIL GHKDYQINFF GEKNLSFSGQ RPVKNADIRP PQAVHRPSFG GLMRPPR
|
| |