| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0264 |
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| Symbol | rplK |
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| ID | 6176390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 309265 |
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| End bp | 309696 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641680009 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_001806981 |
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| Protein GI | 172059329 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0928671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.597405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAGA AGATTGTCGG CTTTATCAAG CTGCAGATTC CTGCAGGTAA AGCCAACCCG
TCGCCGCCGG TCGGTCCGGC ACTGGGCCAG CGCGGCCTGA ACATCATGGA GTTCTGCAAG
GCGTTCAACG CGCAGACTCA AGGTATGGAG CCGGGTCTGC CGGTGCCGGT GGTCATCACG
GCATTCGCTG ACAAGAGCTT CACGTTCGTG ATGAAGACGC CGCCGGCGAC CGTCCTGATC
AAGAAGGCGG CGAAGGTGGA CAAGGGCTCG AGCAAGCCGC ACACCGACAA GGTCGGTTCG
ATCACGCGCG CTCAAGCCGA AGAAATCGCG AAGACCAAGA TGCCGGATCT TACGGCAGCT
GATCTGGACG CAGCCGTTCG CACCATCGCT GGTAGCGCAC GCTCGATGGG CATCACTGTG
GAGGGCGTGT AA
|
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| Protein sequence | MAKKIVGFIK LQIPAGKANP SPPVGPALGQ RGLNIMEFCK AFNAQTQGME PGLPVPVVIT
AFADKSFTFV MKTPPATVLI KKAAKVDKGS SKPHTDKVGS ITRAQAEEIA KTKMPDLTAA
DLDAAVRTIA GSARSMGITV EGV
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