Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0204 |
Symbol | |
ID | 6177626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 241138 |
End bp | 242217 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641679939 |
Product | 2-nitropropane dioxygenase NPD |
Protein accession | YP_001806921 |
Protein GI | 172059269 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.155085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCC GTGCATTTTC CACCCCGTTT GCCGAACGCT TCGGCCTGCG CCTGCCGCTC GTGCAGGCGC CGATGGTCGG CGCCACCACG GCCGCGATGG TCGCGGCCGC GTCCAATGCC GGCGCGCTCG GCAGCCTCGG CGCCGGCGCG TTCGAGCCGG CGCGCCTCGC GACCGAAGTC GACGCGATTC GCGCGGCGAC CGCGCGGCCG TTCGCCGTGA ACCTGTTCGT GTTGTCCGAG GTCGCGCCCG ATGCGGCGAG CGTCGCCCGC GCGCTCGCCG CGATCGATCC GCTGAACGCG GCGCTCGGGC TGCCGCCCGG CACCGCGCCG GCGCGCTACG CCCCCGACTT CCGCGCGCAG CTCGATGCGC TCGTCGCGCT GCGGGTGCCG GTCGCGAGCT TCACGTTCGG CGTGCTCGAC GCGGCCGACG TCGCGCGCCT GAAGGCGGCC GGCACCTACG TGATCGGCAC CGCGACGCAC GTCGCCGAAG GGCTCGCATG GCAGGCGGCC GGCGCCGACG CGCTGTCCGC GCAGGGCGCC GAAGCCGGCG GCCATCGCGG CACCTTCATC GGCTCGGCCG ACGATGCGCT GATCGGCACG CTCGCGCTGG TGCCGCAGCT CGTCGACGCG ACCGGCCTGC CCGTGCTCGC CGCGGGCGGC ATCATGGACG GCCGCGGGAT CGCCGCCGCG CTCGCGCTCG GCGCGCAGGC CGCGCAACTC GGCACCGCGT TCCTGACGTG CGCGGAAAGT GCGATCGCGG CGGACTGGAA GGCGCGGCTG CTTGCGAGCG CCGATACGTC GACGCAGGTC ATGCGCGCGA TCACCGGGCG TCACGCGCGC GGATTGCGCA ACACGCTGAT GGCGCGGCTC GGCGAACGCG TGGCCGATGC CGCACCGTAT CCGGTGCAGA ACGCGCTGAC GCAGCCGCTG CGCCAGGCCG CCGCGCGCGC GAACGACGGC GACTACCTGT CGCTGTGGGC CGGGCAGGGC GCGCCGCTCG CGCGGCGGCG CGATGCCGCG CTGACGACGT CGCAACTCGT CGACGCGCTC GACGCCGAAT GGCGCGCAAT CGTCGCATGA
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Protein sequence | MSARAFSTPF AERFGLRLPL VQAPMVGATT AAMVAAASNA GALGSLGAGA FEPARLATEV DAIRAATARP FAVNLFVLSE VAPDAASVAR ALAAIDPLNA ALGLPPGTAP ARYAPDFRAQ LDALVALRVP VASFTFGVLD AADVARLKAA GTYVIGTATH VAEGLAWQAA GADALSAQGA EAGGHRGTFI GSADDALIGT LALVPQLVDA TGLPVLAAGG IMDGRGIAAA LALGAQAAQL GTAFLTCAES AIAADWKARL LASADTSTQV MRAITGRHAR GLRNTLMARL GERVADAAPY PVQNALTQPL RQAAARANDG DYLSLWAGQG APLARRRDAA LTTSQLVDAL DAEWRAIVA
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