Gene BamMC406_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0169 
Symbol 
ID6175971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp204665 
End bp205489 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID641679904 
Productflagellin 
Protein accessionYP_001806886 
Protein GI172059234 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.521055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.980179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACA TCAATACCAA CATCCTTTCG CTGACGACGC AGACGAACCT GTCGGGCTCG 
CAAAGCGCAC TGTCGCAAGC GATCAACCGC CTGTCGTCGG GCAAGCGCGT GAACACGGCA
GCCGACGACG CGGCAGGTCT CGCGATCTCG ACGACGCAAA CGGCTGCGAT CAACGCGCTG
ACGCAAGGTG TCGCAAACGC GAACAACGGT ATCTCGATGA TCCAGACCGC AGCCGGCGCG
CTGCAGTCGA CCGTCGACAA CCTGCAGCGT ATCCGTACGC TGGCAGTCGA ATCCGGCGAC
GGCTCGCTGG ACTCGAACGC ACGTGCAAAC CTGCAAGCTG AAGTCACGAC GCGTCTGGGC
GAAATCGACC GCGTGGCAAC GCAAACGACG TTCAACGGCC AGACCATCCT GAGCAACGCC
GGCAACGTCA CGTTCCAGGT CGGCGCATCG GCGAACCAGA CCGTCGCCGT CAACTTCGGC
GCGACCGTGT GGACGAGCAC GGGCGCAGGC CTGAGCCTGA GCGGCCTGAC GGTCAGCGAC
CAGACGAGCG CACAGTCGGC GATCACGGCA ATCGACACGG CACTGAAGAA CGTCAACACG
TTCCAGGCAA CGCTGGGTGC AGCACAGAAC ACGTTCCAGG CTGCAATCAC GACGACGCAA
ACGCAGGCAA CCAACATGAG CGCAGCGCGT TCGCAGATCA CCGACGCGGA CTTCGCGACG
GAAACGGCGA ACCTGAGCAA GGCGCAAGTG CTGCAGCAAG CCGGCATTTC GGTGCTCGCG
CAAGCGAACT CGCTGCCGCA GCAGGTCCTG AAGCTCCTGC AGTAA
 
Protein sequence
MLNINTNILS LTTQTNLSGS QSALSQAINR LSSGKRVNTA ADDAAGLAIS TTQTAAINAL 
TQGVANANNG ISMIQTAAGA LQSTVDNLQR IRTLAVESGD GSLDSNARAN LQAEVTTRLG
EIDRVATQTT FNGQTILSNA GNVTFQVGAS ANQTVAVNFG ATVWTSTGAG LSLSGLTVSD
QTSAQSAITA IDTALKNVNT FQATLGAAQN TFQAAITTTQ TQATNMSAAR SQITDADFAT
ETANLSKAQV LQQAGISVLA QANSLPQQVL KLLQ