Gene BamMC406_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0117 
Symbol 
ID6177232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp135879 
End bp137531 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content72% 
IMG OID641679852 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001806835 
Protein GI172059183 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT CGAACCATGC CGTCACGAAC CAGTTCGACG AACTGGTCGA CTATAACCTC 
TTCGCCACCG ACATCGCGCT GCGCGACGCG CTGGCCCGAG CGGGCGCCAA CTGGGCCGTG
CCGCGACTCG ACGCATACGG CGCGCGGCTC GGCAGCGCCG ACACCGCACG CCTCGCCGAC
GAAGCGAACC GCCACACGCC GGAGCTGAAC GCGTTCGACC GGCGCGGCCG GCGCATCGAC
CGCGTCGACT TCCATCCGGC CTGGCACACG CTGCTCGGCC TGTACCGCAA CGAAGGCTTC
GTGTCGCTCC CGTTCCGCGA TACGCGCCCC GGCCGCTGGG CCGCAAGCGC CGCCGGCTTC
TACCTGCACG GCCAGATCGA GGCCGGCACG CTGTGCCCGG CGACGATGAC GCAGGCCGCG
ATTCCGGTGC TGCAGAAGGA GCCCGCGCTG TGGGACCTGC TGCGCGACAA GCTGTACAGC
GACGACTACG ATCCGCGCGA CGTGCCGGTC GCCGACAAGC GCTCGATCTG GTTCGGCATG
GGGATGACCG AGAAACAGGG CGGCTCCGAC GTGCGCGCGA ACACGACGCT CGCGACCGCG
GTCGGCGCAG GCGGGCGCGG CGGCGAATAC CGGCTGCGCG GCCACAAGTG GTTCTTCTCC
GCGCCGATGT GCGACGCGCA CCTGGTCGTC GCGCGCACCG AGGCCGGCGG CCCGTCGTGC
TTCTACGTGC CGCGCTGGCG GCCGGACGGC ACGAAGAACG CGGTCGAGAT CCAGCGGCTG
AAGAACAAGG TCGGCAACCG CAGCAACTCG AGCAGCGAGA TCGAGCTGAA CGACGCGTGG
GGCATCATGC TCGGCGACGA AGGCCGCGGC ATTCCGACCA TCATCGAGAT GGCCACCTAC
ACGCGGCTGA GCTGCGTGCT CGGCAGCGCG GCGATGCTGC GCCAGGGCGT CGTGCAGGCG
ATCGCGTACA CGCGCCAGCG CCATGCGTTC GGCCGCGCGC TCGCCGAGCA GCCGCTGATG
CGCACCGTGC TCGCCGATCT CGCGCTCGAA AGCGAGGCCG CGCTCGCGCT CGCGATGCGG
CTCGCCGACG CGTTCGAACG CGACGACTCG CCGCGCGAAC GCGCGTGGAA ACGAATCGTC
ACGCCCGCCG CGAAGTTCTG GGTCTGCAAG CGCGCGGTCG AGCTGACCGG CGAGGTGATG
GAAGTGTTCG GCGGCAACGG CTACGTCGAC GACGGCCCGA TCGCGCGGCT GTTCCGCGAA
GCGCCGGTCA ACTCGATCTG GGAAGGCTCC GGCAACGTGA TGTGCCTCGA CGTGCTGCGC
GCGGTGTCGC GCGAACCCGA CGCGGCCGCG GCGCTGCTCG CCGAACTAGC CGACCTCGGC
GCGGGCGAAC CGCGCATCCG CGCGGCGCTC GATGCGCTGC GCGCGATGCT CGCGGCGCCG
GCCGACACGC TCGAGGCGTC GGGCCGCGTG TTCGCGCAAC GGCTCGCGCT CGTCGCCCAG
GCGTGCCTGC TGCGCCGCGA TGCGCCGGCG GCGGTCGCCG ACGCGTTCGT CGCGACGCGG
CTCGCCGCGC CCGATTGGGG CCGCATCGCG GGCGGCTTCG ATCCGCATGC GATCGACGTC
GCCGCGCTGC TGCAGCGCGC GTACCCGGCC TGA
 
Protein sequence
MTESNHAVTN QFDELVDYNL FATDIALRDA LARAGANWAV PRLDAYGARL GSADTARLAD 
EANRHTPELN AFDRRGRRID RVDFHPAWHT LLGLYRNEGF VSLPFRDTRP GRWAASAAGF
YLHGQIEAGT LCPATMTQAA IPVLQKEPAL WDLLRDKLYS DDYDPRDVPV ADKRSIWFGM
GMTEKQGGSD VRANTTLATA VGAGGRGGEY RLRGHKWFFS APMCDAHLVV ARTEAGGPSC
FYVPRWRPDG TKNAVEIQRL KNKVGNRSNS SSEIELNDAW GIMLGDEGRG IPTIIEMATY
TRLSCVLGSA AMLRQGVVQA IAYTRQRHAF GRALAEQPLM RTVLADLALE SEAALALAMR
LADAFERDDS PRERAWKRIV TPAAKFWVCK RAVELTGEVM EVFGGNGYVD DGPIARLFRE
APVNSIWEGS GNVMCLDVLR AVSREPDAAA ALLAELADLG AGEPRIRAAL DALRAMLAAP
ADTLEASGRV FAQRLALVAQ ACLLRRDAPA AVADAFVATR LAAPDWGRIA GGFDPHAIDV
AALLQRAYPA