| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0115 |
|---|
| Symbol | |
|---|
| ID | 6178688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 133109 |
|---|
| End bp | 133942 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641679850 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001806833 |
|---|
| Protein GI | 172059181 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGAGG ACCACGATGG TGAAGTTCAG GTCATACTGA GTGCGGCCCA GTTGGCTGCC
GTACTGAAGC GCCAGACGAT CAGTCCGGGC GAGATGTTGA GCAACCGGTT ATGGGGCGGC
CTGCACGTCG TGGGCGGCGT GCTTGAGATG GCAGGCGCCG CGGCGTTGTG CGTCGCGCCG
GAACCGACCG GCCTCACCAA ACTCGGTTGT GTCGCGTTCG GCGTACACGG CGCCGACACG
GGGGCAGCCG GCCTGAACCA GGTCTGGACT GGGCGACAGA CGAGCGCGCT ATTGCAACAC
GGCGTGAGCA AGCTGGTCGA AGCGGCAAAA GCGCCGCCGG AAATGGCTGA TCATGTCGGG
CTGTCGCTGG AGCTTGCAGT GCCGTTCGGG CTCGCAGGCG CGATCAAGGC GATTCGTGCG
TCGAGCATTA CGGCGGGACG GATCAATCTG ATGCAGCATG AGGCAAGCGC CGCAAACCCA
CGGCTGGGCG GCCATACGAT TGCCAAGCAT GTGGGAAAAA GTGAAGCTTA TCTCCGGTCC
CGACTCAAAA ATGAACCGTC GAAAGAGTTT GTATCGTCAT TTTGGAGCCT GGCAGAGGCG
GAATGGGCCA TTTCGAGTGT CATGCAGCAA AACACGACCC GAATTGTTGC GTGGGCTCAG
TCCACCTCAA GGGCCCCTCT CGTGCTCAAT GAAAACGTCG GACGAAGCGT CGGTTATGGG
TTGAGCAGGG ACAATGAGAT CATCGGAAAT CTAAGCCGCG TTCAGATCGT CTTGAAGGCA
CAGTCATTCA ACGGAATGCC TTTCTATATT GTCACGTCGT ATTTGACCGA ATGA
|
|---|
| Protein sequence | MREDHDGEVQ VILSAAQLAA VLKRQTISPG EMLSNRLWGG LHVVGGVLEM AGAAALCVAP
EPTGLTKLGC VAFGVHGADT GAAGLNQVWT GRQTSALLQH GVSKLVEAAK APPEMADHVG
LSLELAVPFG LAGAIKAIRA SSITAGRINL MQHEASAANP RLGGHTIAKH VGKSEAYLRS
RLKNEPSKEF VSSFWSLAEA EWAISSVMQQ NTTRIVAWAQ STSRAPLVLN ENVGRSVGYG
LSRDNEIIGN LSRVQIVLKA QSFNGMPFYI VTSYLTE
|
|---|
| |