Gene BamMC406_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0093 
Symbol 
ID6177375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp104656 
End bp105414 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content65% 
IMG OID641679828 
ProductABC transporter related 
Protein accessionYP_001806811 
Protein GI172059159 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.899173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGG ACACGACGAT GCCGATTCTC GAGGTGCGCG GACTGGCGGT CCGATACGGG 
AAAGTCGAGG CGCTGCACGG TGCGGCGATC AAGGTGGGCG CCGGGCAGAT CGTCAGCGTC
ATCGGCCCGA ACGGTGCCGG CAAGTCGACG ATGCTGAACG CGATCATGGG TGCGTTGCCC
GTGACCGGGC ATGCGTCGGG CACGGTCATG TATCGCGGCC ACGACGTGGG CGCGCTACCG
GTCGAGCAGC GCGTCGCGCG CGGGATGTGC CTCGTGCCGG AAAAGCGCGA GCTGTTCAGC
ACGATGACGG TCGAGGACAA CCTCGTGCTG GGCGCGTATC GCCGCAAGCT CGCGGGCGAG
TCCAACTTTC TCGACCAGCT CGATCATGTG TTTGCGCTGT TTCCGCGGCT CAAGGAGCGG
CGCAAGCAGG CGGCCGGTAC GCTGTCGGGC GGCGAGCGGC AGATGCTTGC GGTGGGCCGC
GCGCTGATGG GCAAACCCGA CCTGCTGATG CTCGATGAGC CGAGCCTCGG GTTGGCACCG
CTGATCGTGA AGGAAATTTT TCATATCATC AGCGCGTTGC GCGGCACGGG TGTGGCGACG
CTGCTGATCG AGCAGAACGC GCGGGCGGCA CTGCAGATCT CGGACTACGG TTATGTACTG
GAGACGGGGG AGCTAGCGCT GGAAGGGCCG GCGGCCGAGC TGGCACAAAA TCCGCGCGTG
ATCGAAACTT ACCTGGGGTT GGCGAAGAAA ACGGCTTGA
 
Protein sequence
MTADTTMPIL EVRGLAVRYG KVEALHGAAI KVGAGQIVSV IGPNGAGKST MLNAIMGALP 
VTGHASGTVM YRGHDVGALP VEQRVARGMC LVPEKRELFS TMTVEDNLVL GAYRRKLAGE
SNFLDQLDHV FALFPRLKER RKQAAGTLSG GERQMLAVGR ALMGKPDLLM LDEPSLGLAP
LIVKEIFHII SALRGTGVAT LLIEQNARAA LQISDYGYVL ETGELALEGP AAELAQNPRV
IETYLGLAKK TA