| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2434 |
|---|
| Symbol | gmd |
|---|
| ID | 4886028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 2351926 |
|---|
| End bp | 2352969 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640132371 |
|---|
| Product | GDP-mannose 4,6-dehydratase |
|---|
| Protein accession | YP_001063428 |
|---|
| Protein GI | 126444665 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1089] GDP-D-mannose dehydratase |
|---|
| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.186201 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAG CACGCAAGGC GATCATCACC GGGATAACGG GCCAGGACGG CGCTTATCTG
GCGAAGCTGC TGCTCGACAA GGGCTACGAA GTCGTCGGCA CGTATCGCCG CACGAGCTCG
GTGAACTTCT GGCGCATCGC CGAACTGGGC GTCGACAAGC ATCCGGGCTT GACGCTCGTC
GAACACGATC TGACCGATCT CGGCTCGAGC CTGCGCCTCG TCGAGCGCAC GCAGCCGCAC
GAGCTGTACA ACCTCGCCGC GCAGAGCTTC GTCGGCGTAT CGTTCGACCA GCCGGCGACG
ACGGCCGAAG TCACCGGCCT CGGCGCGCTG CACCTGCTCG AGGCGATCCG CGTCGTGAAC
CCGAAGATCC GCTATTACCA GGCGTCGACG TCGGAGATGT TCGGCAAGGT GCAGGCGATT
CCGCAAATCG AGAGCACCCC GTTCTATCCG CGCAGCCCGT ACGGCGTCGC GAAGCTGTTC
GCGCACTGGA CGACGCTCAA CTATCGCGAG TCGTACGGCA TCTTCGGCTC GAGCGGGATC
CTGTTCAATC ACGAATCGCC GCTGCGCGGC CGCGAGTTCG TCACGCGCAA GATCACCGAT
ACCGTCGCGA AGATCAAGCT CGGCAAGGCG AGCCGGCTCG AGCTCGGCAA CATGGGCGCC
AAGCGCGACT GGGGCTTCGC GCTCGAGTAC GTCGAAGGGA TGTGGCGCAT GCTGCAGGCG
GACGAGCCCG ATACCTACGT GCTCGCGACG AACCGCACCG AGACGGTCCG CGATTTCGTG
CGGATGGCGT TCGCGGCGGC CGGCTATCAG CTCGAATGGA GCGGCAAGGG CGAGGACGAG
CGCGGCATCG ATACGGCGAC GGGCAACGTG CTCGTATCGG TGAATCCGAA GTTCTACCGG
CCCGCCGAAG TCGATCTGCT GATCGGCTGC GCGGACAAGG CGCGGGACAA GCTCGGCTGG
GTGCCGAAGA CGACGCTCGA GGCGCTCTGC CGGATGATGG TGGAGGCCGA CCTCACGCGC
AACCGTCATC ATGAGACCTT CTGA
|
|---|
| Protein sequence | MTQARKAIIT GITGQDGAYL AKLLLDKGYE VVGTYRRTSS VNFWRIAELG VDKHPGLTLV
EHDLTDLGSS LRLVERTQPH ELYNLAAQSF VGVSFDQPAT TAEVTGLGAL HLLEAIRVVN
PKIRYYQAST SEMFGKVQAI PQIESTPFYP RSPYGVAKLF AHWTTLNYRE SYGIFGSSGI
LFNHESPLRG REFVTRKITD TVAKIKLGKA SRLELGNMGA KRDWGFALEY VEGMWRMLQA
DEPDTYVLAT NRTETVRDFV RMAFAAAGYQ LEWSGKGEDE RGIDTATGNV LVSVNPKFYR
PAEVDLLIGC ADKARDKLGW VPKTTLEALC RMMVEADLTR NRHHETF
|
|---|
| |