Gene BURPS668_A2286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A2286 
Symbol 
ID4886271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp2213330 
End bp2214007 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content77% 
IMG OID640132223 
Producttype III secretion protein HrpB4 
Protein accessionYP_001063280 
Protein GI126445440 
COG category 
COG ID 
TIGRFAM ID[TIGR02560] type III secretion protein HrpB4 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0317665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGCG GCGCGCCGGT GGCAAGCGTC GAGGCCCGGG CCGCGTGGCT CGCGGGCTAC 
GACGCGAACG CGCGACGCGC AGCGGACTGG GTCCACGCGA GCTGGCACGG CGCGCTCGCG
CCGCTCGTCG CGGCGATGCA TGAGCATGCG CCCGCGCTGC GCGCCGCATG CTCGCTGCTG
CTGCTGCGCA CGCTCGGGGG CTCCGCGCCG ACGCTCGGCG GATTCGACGC GCTCGCCGAC
CGTCTCGCCG CGCTGCCCAT CGCCGATACG CTGCGGCTGT TGCGCATGCG CGCGCTGCTG
TTCCGGCGCA CCGAGCTGCG CCACTGGATC GACCGCGCGA GCCGCGAGCG GCTTGCCGGC
TGGGTCGGCG CCGACGGCGG CCGCGCGCTC GCCGCGCTCT GCGCGCAGCC CGACGCGCGG
CGCGAGCGCG AGCGCCGCGA GCCGCTCGCG CCGCTCGCGC AACTGTCCGC CGACGATGTC
GCGTGGGAAG GCTGGTGCCT GTTCGAGCAC GAGCGGGTGT GGTCGCCGGC GGGCCCGATG
CGCATCGTGC GTCTCGCGCT GCCGCGCGAG CCCGCGCGCG CGCCGTGGCT CGAGCGCGCG
GCGGCGGACG CGGACGGCGC GATGCTGCTC GCGCGCGTGC CGTCGCTGTT TCCGGAGTGG
ACATGGCTTT TTGGCTGA
 
Protein sequence
MTGGAPVASV EARAAWLAGY DANARRAADW VHASWHGALA PLVAAMHEHA PALRAACSLL 
LLRTLGGSAP TLGGFDALAD RLAALPIADT LRLLRMRALL FRRTELRHWI DRASRERLAG
WVGADGGRAL AALCAQPDAR RERERREPLA PLAQLSADDV AWEGWCLFEH ERVWSPAGPM
RIVRLALPRE PARAPWLERA AADADGAMLL ARVPSLFPEW TWLFG