| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2180 |
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| Symbol | yscF |
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| ID | 4887959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | + |
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| Start bp | 2116698 |
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| End bp | 2116967 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640132117 |
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| Product | type III secretion system needle protein |
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| Protein accession | YP_001063174 |
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| Protein GI | 126443759 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02105] type III secretion apparatus needle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.779344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAATC CCCCGACCCC GCTGCTGACC GACTACGAGT GGTCAGGCTA CCTGACCGGC
ATCGGCCGCG CGTTCGACGA CGGCGTGAAG GATCTGAACA AGCAGTTGCA GGACGCGCAG
GCGAACCTCA CGAAAAACCC GAGCGATCCG ACCGCGCTCG CCAACTATCA GATGATCATG
TCCGAATACA ACCTGTACCG GAACGCGCAG AGCAGCGCGG TCAAATCGAT GAAGGACATC
GATTCGTCGA TCGTCTCGAA CTTCCGCTAA
|
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| Protein sequence | MSNPPTPLLT DYEWSGYLTG IGRAFDDGVK DLNKQLQDAQ ANLTKNPSDP TALANYQMIM
SEYNLYRNAQ SSAVKSMKDI DSSIVSNFR
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