| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2001 |
|---|
| Symbol | |
|---|
| ID | 4888247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 1938296 |
|---|
| End bp | 1938559 |
|---|
| Gene Length | 264 bp |
|---|
| Protein Length | 87 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640131939 |
|---|
| Product | HrpO family type III secretion protein |
|---|
| Protein accession | YP_001062996 |
|---|
| Protein GI | 126443963 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4794] Type III secretory pathway, component EscS |
|---|
| TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.573614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCG ACTCGCTGAT CCGTTTCTGC ACGCAAGCCA TGCTGCTCTG CCTGAGCGTC
TCGCTGCCGC CCGTGATCGT GGCGGCCCTG GTCGGGCTTG GCGTATCGTT CGTGCAGGCG
ATCACGTCGC TGCAGGATCA GACCTTGCCG CAAGTGCTCA AGCTGATCGC GGTCACGATC
ACGATCATGG TTGCCGCGCC GACCGGCTGT GCGGCGATCC TGCATTTCGC GAATCAGATG
ATGCAGCTTG CCGTCCCGCA ATGA
|
|---|
| Protein sequence | MEIDSLIRFC TQAMLLCLSV SLPPVIVAAL VGLGVSFVQA ITSLQDQTLP QVLKLIAVTI
TIMVAAPTGC AAILHFANQM MQLAVPQ
|
|---|
| |