Gene BURPS668_A1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A1998 
Symbol 
ID4888818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand+ 
Start bp1935664 
End bp1936338 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID640131936 
Producttype III secretion protein HpaP 
Protein accessionYP_001062993 
Protein GI126443932 
COG category 
COG ID 
TIGRFAM ID[TIGR02557] type III secretion protein HpaP 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.191968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCATA TCGGCTCCCG TCCATTGCGC ATCATCCCGG GCAGCACACC CGCGGCGCCG 
GACGAAACGC GCCAACGCCG CTTCGACTAC GCTTCGCTCG TTCGTGCCCA GGCGCGTCGC 
GGCCCCGTTA CACGAAGCGC GCCGCCGCCC CCGCCGGGTT CGGAAGGAGG CTGGGCGCTC 
GCGCCTCCAT CCGGATCATG CGACGAAGCA GCGCCCGCCG CCGGCAATAC GACGCGCGCG 
CCGAGCACGC CGTTCGACGA ACCGCTTGAC GGCAATCCCG TCATCGAACC ACCCACCTGC 
CCGATCGACG CACATGAATC ATTCGGGCGC GTCCGCCATG CGATCGCCCC TGTGGTATCG 
GTCATCGTCG AACGGCAATC GCACTTCACG AGGATCGTCG GCATGCTGGC GCGCGAGATC 
GGCGCATTTT GCAGCGACGG CGCGATTGTC TGCGCCGGCA ATTGGGAAGC CCAACTCACT 
CTCGACCCTG AATTGCTGCC GCGTACGACC TTGCATGTGG CGCTTTCGCG TTTCATCATC 
AGAATTCGGT TCGACGTTCC CGATGGTGAA ACGCGTGATT TACTCTTGAC GCATCGCTCG 
CTGCTCGAAC GCGAACTCGA CGAGGTGATG CGCTGTTGGG GCGAAGCTCG CGACATCCAG 
CTATCCGCGT GGTAA
 
Protein sequence
MAHIGSRPLR IIPGSTPAAP DETRQRRFDY ASLVRAQARR GPVTRSAPPP PPGSEGGWAL 
APPSGSCDEA APAAGNTTRA PSTPFDEPLD GNPVIEPPTC PIDAHESFGR VRHAIAPVVS 
VIVERQSHFT RIVGMLAREI GAFCSDGAIV CAGNWEAQLT LDPELLPRTT LHVALSRFII 
RIRFDVPDGE TRDLLLTHRS LLERELDEVM RCWGEARDIQ LSAW