| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1971 |
|---|
| Symbol | |
|---|
| ID | 4886744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 1906915 |
|---|
| End bp | 1909101 |
|---|
| Gene Length | 2187 bp |
|---|
| Protein Length | 728 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640131909 |
|---|
| Product | transmembrane phospholipase protein |
|---|
| Protein accession | YP_001062966 |
|---|
| Protein GI | 126445555 |
|---|
| COG category | [I] Lipid transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0398] Uncharacterized conserved protein
[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC CCTCTCCTTC GCCGCCCGAC GCGCGGGCAA ACCGCGCCGC CGAAGCGCGC
GCGCATGGCG GACTGCTCGA ACCCGGCCGC AACTGCGACG CGCTGCTGCG CGCGGAGCGC
TTCGCGACGC TCATCGACGG CGACGCGTAT TTCTCGACGC TGCGCGCGGC GCTGCGGCGC
GCGCGCCACA CGGTCTTCAT CGTCGGCTGG GACATCGACA GCCGGCTGCG GCTCGTGCCG
GACGGCGCGC ACGACGGCTG GCCGGAGCCG CTCGCGGCGT TCCTGCACGC GCTCGCGAAC
GCACGCCGAC GGCTGCGGAT CTATGTGCTG GCATGGGATT TCTCGATGAT CTACGCGCTC
GAGCGCGAAT GGCCGCCCGT GTACCGCACC GCTTGGCGCT CGCGGCACGG CATCGTGTTC
CGGCTCGACG GCACGCACCC GCGCGGCGCG TCGCATCACC AGAAGTTCGT CGTGATCGAC
GATCGCGTCG CGTTCGTCGG CGGCTTCGAT CTGACGCGCT CGCGCTGGGA CACGCCGCGG
CATGCGCCCG ACGAGCCGCG CCGCGTCGAT CCGAACGGCG CGCGCTACGC GCCGTTTCAC
GACGTGCAGG CAATGTTCGA CGGCGACGCG GCGGCCGCGA TCGGCGCGCT CGCGCGCGAG
CGCTGGGCGC GCACCTGCGG CAAGCGCGTC GCGATCCGCG CGCACCGGCG GCGCGCGGCG
GACGACGATC CTTGGCCGCC CAACGCGCCG GTGGACGTGC GCGACGTGAC CCTCGCGATC
GCGCTCACGA CGCCGCGCCA TCGCGGCGGC GACGAAGTCG GCCACATCCG TGCGCTGACC
GCGGATGCGA TCGCGGCCGC GCGCCGCGAC CTGTACATCG AGAACCAGTA CTTCACCGCG
GCCGTCGTGC GCGAGGCGCT CACCGCGCGG CTCGCGGCCG ACGATCCGCC CGACGTCGTC
GTGGTCGCGC CGCGCGAGCA GAGCGGCTGG CTGCAGGAAG CGACGATGGG CGTGCTGCGC
GCGCGGCTGC ATCGTGCGCT CGTCGACGCC GACCGCCACG GCCGCTACCG GCTGCTGTGT
CCGCACGTCG ACGGCCTCGG CGAGCTGTGC GTGAACGTGC ACAGCAAGCT GATGTGCGTC
GACGACGACT ATCTCGTGAT CGGCAGCGCG AACCTGAACA ACCGCTCGAT GGTGCTCGAC
ACCGAATGCA ACATCGTGCT CGCCGCCAAC GGCGAGCCGC GCGTGCGCGA GGCGATCGCG
CGCACGCGCG AGCGCCTGCT CGCCGAGCAT CTGGGCGTAT CGGCCGATGC GGTCGCCGCC
GCGCGCGCCT GCACGGGCCG CCTGAATCGC GCGATCGACG CGCTGCGCGG CGCGCATCCG
CACCGCACGC TGCGGCCGTT CACGCCGAGC GCATCCGCGG ACCTCGATGC GCTCGTGCCG
GTGAGCGCGT GGCTCGATCC GGAGCGCCCC ATCGACGCGG ACCGCCTCAT GAGCGAATTC
GTGCCGCGCG AGCAGAGCCG CTCGCTGACC GCGCGCTTTC TCGCGCTCGG CGCGTTCGTG
CTGTTCGCCG CGGCGCTCGC CGCCGCGTGG CGGTTCACGC CGCTCGGCCA GCACCTGAGC
GTCGCATCGC TCGCGCGGGC AGGCGCGCGC GCCGCCGAGC TGCCGGCCGC GCCCGTCGCG
CTCGTCGCCG GCTACGTGGC CGCCGCGCTG CTCGCGGTGC CCGTCACGCT GCTGATCACC
GCGACGGGCC TCGTGTTCGG CGCATGGCCG GGCATCGCCT ACGCGGCGGC CGGCACGCTG
CTCGCGGCCG CCGCGACATA CGGCATCGGC CGCTGGCTCG GGCGCGACGC GGTGCGGCGG
CTCGCGGGCC ACCGCGCGAA CCGGCTGAGC GAGCACATCG GCCGCCGCGG CATCGTCGCG
ATGGCCGTGC TGCGGCTGCT GCCGATCGCG CCGTTTACGG TCGTCAATCT CGTCGCGGGC
GCTTCGTCGA TCGGGTTTCG CGACTACCTG GTCGGCACGG CGCTCGGCAT GCTGCCGGGC
ATCGTGCTGA CCGTCACGTT CGCGCATCAG TTGAGCGCGG CGCTCGTTCA CCCCACGCCC
GCCGCGTTCG CGTGGCTCGC CGCGATCGGG CTGGCGTTCG TCGGCGTGTC GGCGCTGCTG
TTGCGCGCGC TGGGACGCCG ACGGTGA
|
|---|
| Protein sequence | MTTPSPSPPD ARANRAAEAR AHGGLLEPGR NCDALLRAER FATLIDGDAY FSTLRAALRR
ARHTVFIVGW DIDSRLRLVP DGAHDGWPEP LAAFLHALAN ARRRLRIYVL AWDFSMIYAL
EREWPPVYRT AWRSRHGIVF RLDGTHPRGA SHHQKFVVID DRVAFVGGFD LTRSRWDTPR
HAPDEPRRVD PNGARYAPFH DVQAMFDGDA AAAIGALARE RWARTCGKRV AIRAHRRRAA
DDDPWPPNAP VDVRDVTLAI ALTTPRHRGG DEVGHIRALT ADAIAAARRD LYIENQYFTA
AVVREALTAR LAADDPPDVV VVAPREQSGW LQEATMGVLR ARLHRALVDA DRHGRYRLLC
PHVDGLGELC VNVHSKLMCV DDDYLVIGSA NLNNRSMVLD TECNIVLAAN GEPRVREAIA
RTRERLLAEH LGVSADAVAA ARACTGRLNR AIDALRGAHP HRTLRPFTPS ASADLDALVP
VSAWLDPERP IDADRLMSEF VPREQSRSLT ARFLALGAFV LFAAALAAAW RFTPLGQHLS
VASLARAGAR AAELPAAPVA LVAGYVAAAL LAVPVTLLIT ATGLVFGAWP GIAYAAAGTL
LAAAATYGIG RWLGRDAVRR LAGHRANRLS EHIGRRGIVA MAVLRLLPIA PFTVVNLVAG
ASSIGFRDYL VGTALGMLPG IVLTVTFAHQ LSAALVHPTP AAFAWLAAIG LAFVGVSALL
LRALGRRR
|
|---|
| |