Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A1281 |
Symbol | |
ID | 4888822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 1212777 |
End bp | 1213388 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640131220 |
Product | LysE family translocator protein |
Protein accession | YP_001062278 |
Protein GI | 126445331 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.18583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACTAT CCAGCCTCGC CCTCTTCGCC GCCGCCCTGC TGGTCGCCGC CGGCTCGCCC GGCCCGAGCA TCGCCGCGCT GGTCGCGCGC GTGCTGACCA ACGGAGTGCG CGACGTGTTG CCGTTCCTCG CGGCGATGTG GCTCGGCGAA GTGATCTGGC TGACCTGCGC GGTAGCCGGG CTCACGGCGC TCGCGCACAC GTTCGCATTC GGCTTTCTCG TGCTGAAGTT CGCGGGCATC GCCTACCTCG TGTTTCTCGC GTGGAAGATG TGGTTCGCGC CCGCCGATGA GCCGTCCGGC CAGCTCCCGC GCGGACAGTC GCCGTTGCGC ATGTTTCTGA CGGGCATCGC GGTCACGCTC GGCAACCCGA AAATCATGAT CTTCTATGTC GCGCTGCTGC CGACGATGGT GGATCTGTCT CGCGCAGGGG CCGTCGCATG GCTCGAATTG ACGTTGACGC TGCTCGTCGT GTTGATCACG GTCGACTGCG CATGGGCATG GCTCGCGGCG CGCGCCCGCA GGCTGCTGAC GAGCCGCCGC GCGATGAAGG CGGCGAATCG CGCGAGCGCG GCCGCGATGG CGGGCGCCGC CGTCGCGATC GCGATGCGCT GA
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Protein sequence | MSLSSLALFA AALLVAAGSP GPSIAALVAR VLTNGVRDVL PFLAAMWLGE VIWLTCAVAG LTALAHTFAF GFLVLKFAGI AYLVFLAWKM WFAPADEPSG QLPRGQSPLR MFLTGIAVTL GNPKIMIFYV ALLPTMVDLS RAGAVAWLEL TLTLLVVLIT VDCAWAWLAA RARRLLTSRR AMKAANRASA AAMAGAAVAI AMR
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