Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A1084 |
Symbol | |
ID | 4888648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 1044622 |
End bp | 1046187 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640131024 |
Product | hypothetical protein |
Protein accession | YP_001062083 |
Protein GI | 126443596 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGGAGG GCAACATGTC CGACCCGTCA CGGGAGAATC CCCCGACCGA CGCGCACGCT TCGTCGCTCG TCACGCACGA CGAACCGGTG CCGCGCGGCC GCCGCGCGCC GCGTCCGCTC TGGACGCTCG TGCCGCGCGC CGCCGGCTAC GGCGTCGTGT TCTTCGTCAT CTGGATGGTG CTGACCATCA TGTTTCCGAA CGTCTTCACG CGCTCGTCCG AGCGCGCGGT CGTCAACAAC GAAGTGACGC TCGTCACGTC GCCGGTCGAA GGCGTCGTGA CCGAGCAGCA CGTGACGGCC GGCAAGCCGT TCGACGCGAA CCAGCCGCTC GCGACCGTGC AGAACCCGAA CGTCGATCGC GCGCTGCTGA TCGACCTGAC GGGCAAGAAG CTCGACAACC AGCAGCGCGA GGACGCGGCG CGCGCCGAGC TCGCGGGCGA CGAGAGCCAG CTCGCGTCGA CCGAGCACGA TCTGCAGCGC TATCAGTCCG TGGCACAGAA GGAGCACGCG GCGACCATCC GCGCGCTCGA GGCGCGGCTC GCGGTCGCGC GCGCGCAGGT GGACCAGCAG GAAGACATCG TCAACCGCAA TCAGGCGATG CAGTGGGCAG GCGCCGTGAG CGAGGCGTAC ACCAGCGCGT CGCGCTATCA GCTATCGATC CTGTCGAACG CGAAAGCGGC CGCGGCCGCC GAGCTCGAGC ACGCGGTCGC GAACGGCGAC GCGTCGCGCA GCAAGGTCTA CGCGTCCGCC ACCGACGGGC CGGCCGCGTC GCTGTCGCAG CGCGGCCGGC TGCTCGGCGC GGACATCGCG CAGCGCAAGG CCGAGATCGC GCAGTTCGAC GCTTACGGCC AGTCGGTCGA CAAGCTGATC GCCGCCGAGC AGCAGCGGCT CGACAGGCTG AGCCGCATCG AGATCCGCTC GGGCGAGCCG GGCGTCGCGG AGGACGTGCT CGCCCCGCCC GGCACGCGCG TCGCCGCCGG CGCGACGCTG ATCCGTGCGA GCAACTGCGC GCGCTCGCGT GTGGTCGCCG TGTTCCCGCG CAGCCTGAGC GACGACCTGC TGCCCGGCAC GCATCTGAAC GTGCGGATGG ACGGTGTGCC GGCCGTGCTG CCCGCGTCGA TCGCCGAAGT GCTGCCGCGC GCGTCCGAAG GCGAGCAGGC GCGCTACTTC GTGCCCTTCC CGCCGATCGA AAAGAACGAG ATCTATGTGA TCGCGAAGCT CGACGAGCCG CTCGCGCCGC TGTCGCGCCG CGCGAGCGCC CGGCCGGACG CGCGCTGCGC GATGGGGCGC TGGGCGAGAG TCAGCCTCGA TCGGGGCTGG CTCGCGAGCA ACGTGTCCGG TCTCGCGAAC GTCGATCCGA ACTGGACCGC CGGCGCGCGT TCGGCGCTCG CGCGCGGCGG GCAATGGCTG CGCGACGCCG GCGTGCAAGC CCGGCGCCGG CTCGAGGACT TCGCGACGAA CGCCGCGCGC CGGCTCGGCG AGCGGGCCGC GGACGGGCGG CGCTGGCTGA ACGAGCGGGC GAGCGCGGCC CGACGCTGGC TCGACGATCT GAAATCGGCG GCCTGA
|
Protein sequence | MQEGNMSDPS RENPPTDAHA SSLVTHDEPV PRGRRAPRPL WTLVPRAAGY GVVFFVIWMV LTIMFPNVFT RSSERAVVNN EVTLVTSPVE GVVTEQHVTA GKPFDANQPL ATVQNPNVDR ALLIDLTGKK LDNQQREDAA RAELAGDESQ LASTEHDLQR YQSVAQKEHA ATIRALEARL AVARAQVDQQ EDIVNRNQAM QWAGAVSEAY TSASRYQLSI LSNAKAAAAA ELEHAVANGD ASRSKVYASA TDGPAASLSQ RGRLLGADIA QRKAEIAQFD AYGQSVDKLI AAEQQRLDRL SRIEIRSGEP GVAEDVLAPP GTRVAAGATL IRASNCARSR VVAVFPRSLS DDLLPGTHLN VRMDGVPAVL PASIAEVLPR ASEGEQARYF VPFPPIEKNE IYVIAKLDEP LAPLSRRASA RPDARCAMGR WARVSLDRGW LASNVSGLAN VDPNWTAGAR SALARGGQWL RDAGVQARRR LEDFATNAAR RLGERAADGR RWLNERASAA RRWLDDLKSA A
|
| |