Gene BURPS668_A0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A0276 
Symbol 
ID4888257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp243759 
End bp245147 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content69% 
IMG OID640130217 
Productdiguanylate cyclase 
Protein accessionYP_001061282 
Protein GI126444744 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGGTT TCCTCATTCA ACGCCCGTCT CGCCTGCAGA CGCTTGGGGC CGGAACATTC 
GCGTTGCTGA CGCTGGGCGC GCTCGTGGCC ACCGCGCCGC ACGCGGATCT GCGGCTGCCG
CCGATCGAGC CGTTCCTGCC GATGTGCGCG CTGACCGTGT TCAGCACGTC GCTCATCGCG
GCCTTCCTGC TCGGCGCGCA GTTCATCGTG ATGCGCCGCC CGATTCTCGG CACGCTGGCC
GGCGCGTATG CCTTCGCGGC GATCACGGTC GCGCTTCAAC TGCTCGCGTT TCCCGGCGTC
TTCGCGCCCA CCGGCCTGCT CGGCGCGCGG CATGACAGCG CCGCGTGGCT ATGGACCTTC
TGGCACGGCG GCTTCCCGCT GTTCGTCGTG CTGGCGATGC TGACGCGATA CCGGCTCGCG
AAGCGGCTCA GCAACACCCG CCACGTCGGC CGCTGGCTCG CGACATTGGC CGGCGTGCCG
ATCGCGGTCG CGATCGCGCT CGGCCTCGTC GCGCTGCGCG CGGATCTGCC CGCGCCGTTC
GGCCCGTCGC TCGACAATGC GCTGCGCGCC GCCGATCCGG TGGCGATCGT CATCTGGACG
ATCAACCTCG GCGCGATCGC CGCCGCGCTG TTCGTCGGCC GGATGAGGAC GATGCTCGAC
ATCTGGCTCG TCGTCGTGCT GCTCGCCGGC TTCACCGATA CCAGCCTGAA TCTGCTGAGC
ACCGCGCGCT TCACCGCCGG CTGGTACGTC GCGCGCCTGT TCAGCATGAT CGCGCCGGGC
ATCCTCGTCT GCGTGCTCGT CTGGGAAGTG ACGGTGCTGT ACCGGCGGCT GTTCGACGCG
CACGCATCGC TCATGCGGAC CGCTTCGCAC GACGCGCTGA CGATGGTGTA CAACCGCAGC
TATTTCAACG AACAGTTCGA GCGCGCCTTT CACTACGCAC GCCGGCATAA CGCGCCCCTC
GCGCTCGTGA TGGTCGACGT CGATCATTTC AAGCAGTACA ACGATACGTT CGGTCACCTG
CAAGGGGACA CGTGCCTCGC CGCCGTCGCG GCCGCGCTGT CCGGCGTCGC GGGCCGTGCG
AACGATTTCG TCGCGCGCTA CGGCGGCGAG GAATTCGCCG TCGTGCTGCC CGGGGCGGAC
GAACGCGGCG CGGCGACGAT CGCCGAACGG GCACGGCAGG CCGTCGAGCG GCTGCGCATC
GCCGCCGACA CGGCGCCCGG CTATGTGACG GTGAGCGCCG GCTACGCGGC GAGCAGCGGC
AATCCGTTCG AAACGCCCGG TGCGCTGATC GCGGCCGCCG ACGCGGCGCT CTACCGCGCG
AAGATGCTGG GGCGCAACGT CAGCGCCGCG CCCCACCACG ACATGCAGGA TACGGCGATG
CGCGACTGA
 
Protein sequence
MDGFLIQRPS RLQTLGAGTF ALLTLGALVA TAPHADLRLP PIEPFLPMCA LTVFSTSLIA 
AFLLGAQFIV MRRPILGTLA GAYAFAAITV ALQLLAFPGV FAPTGLLGAR HDSAAWLWTF
WHGGFPLFVV LAMLTRYRLA KRLSNTRHVG RWLATLAGVP IAVAIALGLV ALRADLPAPF
GPSLDNALRA ADPVAIVIWT INLGAIAAAL FVGRMRTMLD IWLVVVLLAG FTDTSLNLLS
TARFTAGWYV ARLFSMIAPG ILVCVLVWEV TVLYRRLFDA HASLMRTASH DALTMVYNRS
YFNEQFERAF HYARRHNAPL ALVMVDVDHF KQYNDTFGHL QGDTCLAAVA AALSGVAGRA
NDFVARYGGE EFAVVLPGAD ERGAATIAER ARQAVERLRI AADTAPGYVT VSAGYAASSG
NPFETPGALI AAADAALYRA KMLGRNVSAA PHHDMQDTAM RD