| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0068 |
|---|
| Symbol | pcaJ |
|---|
| ID | 4888519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 57429 |
|---|
| End bp | 58085 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640130009 |
|---|
| Product | 3-oxoadipate CoA-transferase, B subunit |
|---|
| Protein accession | YP_001061074 |
|---|
| Protein GI | 126445278 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
|---|
| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0850445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAC TGACCCGCGA CGACATGGCG AAGCGCGTCG CGCAAGACAT CCCCGAAGGC
GCCTATGTGA ACCTCGGCAT CGGCGTGCCC ACGCTCGTCG CGAATCACCT CGATCCGAGC
AGGGAAATCT TCCTGCACAG CGAGAACGGC CTGCTCGGCA TGGGTCCCGC CCCGGCGCCG
GGCGCGGAGG ACGACGAACT GATCAACGCC GGCAAGCAGC ACGTGACGCT GCTCACGGGC
GGCGCGTACT TCCATCATGC GGATTCCTTC GCGATGATGC GAGGCGGCCA TCTGGACTAT
TGCGTGCTCG GCGCGTTCCA GGTTTCCGCG CATGGCGATC TCGCGAACTG GCACACGGGC
GCGCCCGATG CGATTCCCGC GGTCGGCGGT GCGATGGATC TCGCGATCGG CGCGAAGCAC
GTGTTCGTGA TGATGGAGCA CCTGACGAAG CAAGGCGAAA GCAAGATCGT CGCCGAATGC
TCGTATCCGG TGACGGGCGT GCGCTGCGTC GATCGCATCT ACACCGATCT CGCGGTGCTC
GACGTGATAA GCGACGGCCT CGCCGTGCGC GAGATCTGCG CCGGCCTCTC GTTCGACGAG
TTGCAGCAGC TCACCGGCGT GCCGCTCATC GACGCGACGC AGAAGGCCGC CGCGTGA
|
|---|
| Protein sequence | MKRLTRDDMA KRVAQDIPEG AYVNLGIGVP TLVANHLDPS REIFLHSENG LLGMGPAPAP
GAEDDELINA GKQHVTLLTG GAYFHHADSF AMMRGGHLDY CVLGAFQVSA HGDLANWHTG
APDAIPAVGG AMDLAIGAKH VFVMMEHLTK QGESKIVAEC SYPVTGVRCV DRIYTDLAVL
DVISDGLAVR EICAGLSFDE LQQLTGVPLI DATQKAAA
|
|---|
| |