Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3883 |
Symbol | |
ID | 4883870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 3785394 |
End bp | 3786017 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640129811 |
Product | LysE family translocator protein |
Protein accession | YP_001060877 |
Protein GI | 126441168 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGTCG AAACCTGGCT CGCGTTCGCC GGCGCGAGCA TCGTGCTTCT GATGATTCCC GGCCCGACGA TCCTGCTCGT GATCGGCGAT TCGCTCGCGA ACCGCCATCG GTCGTCGTGG AGCACCGTCG CGGGCGTCGC GGCGGGCGAC ACCACCGCGA TAACGATCTC GCTCGCCGGC GCGGGCGCGC TGCTCGCGAT GTCGGCGGCC GCGTTCGCCG CGCTCAAGCT TGTCGGCGGC GGCTATCTCG TCTATCTCGG CATCCGTTCG ATTCTGCATG CGCGCCGCAT CGGCGCGATG GACGTGCGCA TCGAGCGCCG TTCGGCGAAG CGGCGTTTCC TGTCCGCGTG GGCCGTCACC GCGCTCAATC CGAAGAGCAT CGTGTTCTTC GTCGCGTTCG TTCCGCAGTT CATCTCGCCG CACGAGACGT TCGCGCGGCA ATGCGCGATC CTGCTGCCGA CCTTCGTGTG CCTCGCGGCG ATCAACGCGG CCTGCTATGC GCGCATCGCG CGTTTCGCCG CTGCGCGGCT GACGGGCGCC GCCGCGCAGC GGCGCTTCGG GTACGGCGGG GGCGCCGCGC TGATCGGCGC GGGCGCATTG ACGCTCGGAA TGTCGCGAAG CTGA
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Protein sequence | MSVETWLAFA GASIVLLMIP GPTILLVIGD SLANRHRSSW STVAGVAAGD TTAITISLAG AGALLAMSAA AFAALKLVGG GYLVYLGIRS ILHARRIGAM DVRIERRSAK RRFLSAWAVT ALNPKSIVFF VAFVPQFISP HETFARQCAI LLPTFVCLAA INAACYARIA RFAAARLTGA AAQRRFGYGG GAALIGAGAL TLGMSRS
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