| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_2694 |
|---|
| Symbol | |
|---|
| ID | 4882067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 2666104 |
|---|
| End bp | 2667348 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640128622 |
|---|
| Product | 2-nitropropane dioxygenase family oxidoreductase |
|---|
| Protein accession | YP_001059718 |
|---|
| Protein GI | 126439626 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGCC CCTTTCAGGA ATTTGCCGTG TCCGTGTCCG TCGTCAAAAC CGCATTCAAG
AATCTCGTGA TCAAGGGCAG ATCGCTGCTG CCGATTGTGC AGGGCGGGAT GGGCGTCGGC
GTGTCCGCGC ACCGGCTCGC CGGCACGGTC GCGTCGCTCG GCGCGTGCGG GACGATCTCG
AGCGTCGACC TGCGTCGGCA TCATCCCGAC CTGATGGCGC GCACCGGCCG CTCGCGCGAT
CGCGCGCTCA TCGACGCGGC GAACCTCGAA GCGCTCGATC GCGAGATCCG CGCGGCGAAG
TCGCTCGCGA ACGGCCGCGG GCTCGTCGCC GTCAACGTGA TGCGCGCGCT GTCCGAATAC
GCTTCGTATG TGCGCCAGTC GTGCGAGAGC GGCGCGCACG CGGTCGTCGT CGGCGCCGGG
CTGCCGCTCG ACTTGCCCGA GCTGACCGCC GATTTTCCCG ACGTCGCGCT GATTCCGATC
CTGTCGGACG CACGCGGAAT CGGGCTCGTG CTGAAGAAGT GGATGCGCAA GAACCGTCTG
CCCGACGCCG TCGTCATCGA GAACCCACGC TACGCGGCGG GCCACCTCGG CGCGCCGACG
ACCGACAGCC TGAACAACCC GAATTTCGCG TTCCCCACGG TGCTCGAAGG CACGTTCGCG
CTGCTCAAGG AGCTCGGCAT CGAGCGCGAG CGGATTCCGC TGATCGCGGC GGGCGGCATT
CACAGCCACG AGCAGGTGCG TCAACTGTTC GCGCTCGGCG CGAGCGCCGT GCAGCTCGGC
ACGCCGTTCG CGGTGACCGA AGAGGGCGAC GCGCATCCGA ACTTCAAGAA AGTGCTCGTC
GAGGCGCAGC CGGACGACAT CGTCACGTTC ATGAGCGTCG CGGGGCTGCC GGCGCGCGCG
GTGCGCACGC CGTGGCTCAC GAACTATCTG GAACGGGAAC GGAAGCTGCA GCGTGCGGCG
AAGCCGCGCA AATGCCTCGT CGGCTTCGAT TGCCTGCAGC AATGCGGGCT GCGCGACGGC
ATCGAGAAGC ACGGCCAGTT CTGCATCGAC ACCCGGCTCG CGTTCGCGCT CGCGGGCGAC
ATCAAGCGCG GGCTGTTCTT CCGCGGCTCG GAAACCTTGC CGTTCGGTCA CGAGATCCGC
TGCGTGCGCG AGCTGATCGA CTATCTGCTC ACGGGCGTCA AGCGTGCGGC CGCCGCGGCG
ATCGCCCCCG CGACGGCGTG CGCGCCCATG CCCGCGCTGG GCTGA
|
|---|
| Protein sequence | MSRPFQEFAV SVSVVKTAFK NLVIKGRSLL PIVQGGMGVG VSAHRLAGTV ASLGACGTIS
SVDLRRHHPD LMARTGRSRD RALIDAANLE ALDREIRAAK SLANGRGLVA VNVMRALSEY
ASYVRQSCES GAHAVVVGAG LPLDLPELTA DFPDVALIPI LSDARGIGLV LKKWMRKNRL
PDAVVIENPR YAAGHLGAPT TDSLNNPNFA FPTVLEGTFA LLKELGIERE RIPLIAAGGI
HSHEQVRQLF ALGASAVQLG TPFAVTEEGD AHPNFKKVLV EAQPDDIVTF MSVAGLPARA
VRTPWLTNYL ERERKLQRAA KPRKCLVGFD CLQQCGLRDG IEKHGQFCID TRLAFALAGD
IKRGLFFRGS ETLPFGHEIR CVRELIDYLL TGVKRAAAAA IAPATACAPM PALG
|
|---|
| |