Gene BURPS668_2332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_2332 
Symbol 
ID4883094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp2311093 
End bp2312160 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content70% 
IMG OID640128260 
Productouter membrane porin 
Protein accessionYP_001059365 
Protein GI126439007 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.17622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACGC TCAGGCTCAG GAGTCCGCAC CGATGCCGCC CGCCCGCGCT CGCCGCCGCC 
GCGACGCTCG CCGCGCTGTC CGGCCCGGCG CACGCGCAGT CGACGCTCAC GCTCTACGGC
GTGGCCGACG CGGGCGTGCA ATATCTGTCG CGCGCCGACG GCCAACATGC CGCCTGGCGA
TTGCAAAACT ACGGAATCCT GCCTTCCCAG CTCGGCATCA AGGGCGAAGA GGATCTCGGC
GGCGGCTGGC GCGCGCGCTT CCAGCTCGAG CAGGGCATCA ACCTGAACGA CGGCACGGCG
ACCGTGCCCG GCTATGCGTT CTTTCGCGGC GCGTACGTCG GCATGGGCGG CCCGGCCGGC
ACCGTCACGC TCGGCCGTCA GTTCAGCACA CTGTTCGACA AGACGCTCTT CTACGATCCG
CTCTGGTACG CGTCGTACAG CGGCCAGGGC GTGCTCGTGC CGCTGTCCGC GAACTTCGTC
GATCACTCGA TCAAGTTCCA GTCGGCGACG TTCGCGGGCT TCGACGTCGA GGCGCTCGCC
GCGATGGCCG GTATCGCGGG TAACACGCGC GCCGGCCGCG TGCTCGAGCT GGGCGGCCAG
TTCACGAGCC GCGGCCTGTC GGCGAGCGCC GTGCTGCATC GCTCGCACGG CACGGCGCAA
GGCGGCGCCG ATCGCTCCGC GCAGCGGCGC GACATCGGCA CGTTCGCCGC GCGTTACGCG
TTCGCCTCGC TGCCGCTCAC CGTCCACGCC GGCGTCCAGC GCCTGACGGG CGAGCTCGAT
CCGGCCCGCA CGATCGTCTG GGGCGGCGCG CGCTATCAGG CAAGCGGACG CCTCGGCTTC
GCGGGCGGCA TTTACCACAC CGATTCGCCG ACGCCGCAGG TCGGCCACCC GACGCTGTTC
ATCGCGAGCA CGACGTGCTC GCTGTCGAAG CGCACCATCG CGTACCTGAA CCTCGGCTAC
GCGAAGAACA GCGGCCGAAG CGCGCAGACC GTCTACGAGT ACGACCCGAC GCCGCTCGCC
GGCGCATCGC AGTTCGGCGC GATGCTCGGC ATGTATCACG TTTTCTGA
 
Protein sequence
MTTLRLRSPH RCRPPALAAA ATLAALSGPA HAQSTLTLYG VADAGVQYLS RADGQHAAWR 
LQNYGILPSQ LGIKGEEDLG GGWRARFQLE QGINLNDGTA TVPGYAFFRG AYVGMGGPAG
TVTLGRQFST LFDKTLFYDP LWYASYSGQG VLVPLSANFV DHSIKFQSAT FAGFDVEALA
AMAGIAGNTR AGRVLELGGQ FTSRGLSASA VLHRSHGTAQ GGADRSAQRR DIGTFAARYA
FASLPLTVHA GVQRLTGELD PARTIVWGGA RYQASGRLGF AGGIYHTDSP TPQVGHPTLF
IASTTCSLSK RTIAYLNLGY AKNSGRSAQT VYEYDPTPLA GASQFGAMLG MYHVF