| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1990 |
|---|
| Symbol | |
|---|
| ID | 4882412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 1966441 |
|---|
| End bp | 1968345 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640127918 |
|---|
| Product | syringopeptin synthetase C |
|---|
| Protein accession | YP_001059025 |
|---|
| Protein GI | 284159947 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3319] Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGTTT CGACCGATAC GTCCGCCGAA GCCCATTCAC CGGCGCCGAA TGCTCGCGAC
ACCGACTCAC GCGCAGACTC ACTCGATATG TCAGACAGTG ACGCACTGCG CCGGATTGCC
GAAGCCGTCG ACGGCGGTGC GGCGAACATC GAGCGAATCG TTCCGCTCGC CCGTGCGCGC
GAGCGTATGC CGACGCGGCC TCGGCTCGAG CGGTGCGGCG GCGGGCGAGT GACGGCGGCG
CACCTCACGC TCGACTCGCG TGCGCGTCTC GATGCGTTGC TGCACGCATT GCAACGCGCG
ATCGACCAGA ACGCGGACCT GCGAACGTGC ATTTTGGGGG CGTGCCTGCG GCGGCCGATG
CAAGTCACGC TTCGCGAGGT TCGCCTGCGA GTGCACGCCG CGACGCTCGA CCCCGACCTC
GATCCCGCCG CGCAGTTGGC CGCGCTGAGC ACCGGGCCCG GCATGCGCAT CGACATGCAA
CGCCCGCCGT GGGTGCTCGC GTGCATCGCG CGCATTCCGG GCAGCGGGCA ATGGCTGCTG
CGGCTCGTGG CAGCCCCGAT CGCGGCCGGA TTCGACGCGC TCGACGCGCT GCTTCGCGAG
GCGGTGATTC ACGGCGACCG GGAGCCCGGG CCGACGCCGT TTCACTGGAC TGTGGAAACG
GCTGTTGAAT CGTGCGGAGG CGAACCTGCG TCGTTGCCGA CCGCGGGCGC GGTTTGGCCG
TCGAACGACG TATCACGCGC TTGCGATCCG GATGCCGCGT CGTGCGTCGA GGCGCGCATC
GCCGCGATCG CGTCCGATCT GCCGGGCGTC GTGCATGGCG GACCACGAGA CGATTTGCGC
GCGCTCGGAC GAACGCCGTT GCAGGCGCTT CGACTCGCGC GCCGTATCCG CGACGCACTG
GGCGTGACCG TACCGGTCGA GTCGATCCTC GCGAGTCCGA CCATCGTCGA GCTTGCCGGG
TACGTCGAGC AATTGCGCTC GCGGCACGTC CGCGACGGCG CTGCGCCCGT GTCGATCGGC
GAAAAACCGG CGGACGCGGA TGCTCGGGCG CAGGCGCAGG CGGATACGGA TACGGCGCAC
ACCGATTGCC TGATCGTCAT TCAAGCAGGC GGCGCCGAAC AAGCGCCGGT GTTCTGCATC
CCGGGCGCGG GGGGCAGCGT CGCGTCGTTC GTTGCGCTTG CGAGCATGCT GCGCGCCGAC
ATACCGGTAT ACGGCTTGCA GCCTCGCGGG CTGGACGGCC TGGGGCCGCC GGACCGATCC
GTCGAAGCGG CTGCGCGCCG GTACGCGCGA GCCATTCTGG ATGCCGCCCC GCCCGGGCCG
CCGCGCATCG TCGGCCACTC GTTCGGCGGC TGGATCGCGC TCGAGACAGC GCGGCTGCTG
GACGGCATGG GAGCGCGCTG CGCCCCGCTC GTCCTGCTCG ATTCGAATCC ACCGCCCGCG
TCGCAGGCCT GGCGCGCGCC TTCCGAGGCA GACATGCTGC GCACGCTCGT CGGCCTGCTC
GAGCAGGCCG CGGGCGGCGC ACCATCCGGG ATCGGCGACG AAGAAATCGC CCGTTGCGCG
GCAGCGGGCG AGGATGCGCG GGATGCGCTC GTGCACGCCT GCATGGTGAG GACCGCCCTG
CTGCCGCCGC GCGCGCCGGT CGAAACGGTG CGGCACCTGC GGCGGGTATT CGAAGCCCAT
TCGAGCACCC GCTACGCGCC GGGCGGCCGA TACGCGGGCG ACGCAACGGT GATCGTCGCC
AACGGCGATC GCGACGCGGG CGAGATGGTG CCGGCGTTCG GATGGGCCGC GCTGATCGAG
CGAGTCGAGG TGGCCGTGAC GCCGGGCAAT CACATGAGCA TGCTCGCGGC GCCGTATGTT
CGTCACGTCG CGCTGACGAT GAAGGCGGTA TGGCGCATGA TCTGA
|
|---|
| Protein sequence | MHVSTDTSAE AHSPAPNARD TDSRADSLDM SDSDALRRIA EAVDGGAANI ERIVPLARAR
ERMPTRPRLE RCGGGRVTAA HLTLDSRARL DALLHALQRA IDQNADLRTC ILGACLRRPM
QVTLREVRLR VHAATLDPDL DPAAQLAALS TGPGMRIDMQ RPPWVLACIA RIPGSGQWLL
RLVAAPIAAG FDALDALLRE AVIHGDREPG PTPFHWTVET AVESCGGEPA SLPTAGAVWP
SNDVSRACDP DAASCVEARI AAIASDLPGV VHGGPRDDLR ALGRTPLQAL RLARRIRDAL
GVTVPVESIL ASPTIVELAG YVEQLRSRHV RDGAAPVSIG EKPADADARA QAQADTDTAH
TDCLIVIQAG GAEQAPVFCI PGAGGSVASF VALASMLRAD IPVYGLQPRG LDGLGPPDRS
VEAAARRYAR AILDAAPPGP PRIVGHSFGG WIALETARLL DGMGARCAPL VLLDSNPPPA
SQAWRAPSEA DMLRTLVGLL EQAAGGAPSG IGDEEIARCA AAGEDARDAL VHACMVRTAL
LPPRAPVETV RHLRRVFEAH SSTRYAPGGR YAGDATVIVA NGDRDAGEMV PAFGWAALIE
RVEVAVTPGN HMSMLAAPYV RHVALTMKAV WRMI
|
|---|
| |