| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1897 |
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| Symbol | |
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| ID | 4884275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | + |
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| Start bp | 1858451 |
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| End bp | 1860892 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640127825 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_001058932 |
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| Protein GI | 126440580 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.377011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCATGC TGGCCGCCGG CAGCCATGCC CGGGCGACGG AGTTCAATGC GTCGTTCCTG
AGCATCGACG GCAGGAACGA CGTCGACCTG TCGCAGTTCG CGCAGGCGGA CTACACGCTG
CCGGGCACAT ACCTGCTCGA CGTGCAGGTC AACGACGTGT TCTTCGGCCT GCAGCCGATC
GAATTCGTCG CGCACGACGG CGGGCAGGGC GCGCGCGCGT GCGTCGCGCC CGAACTCGTC
GCGCAGTTCG GGCTGAAGAA GTCGCTCGTC GAGAACCTGC CGCGCACGAT GGGCGGCCGC
TGCGCGGATC TCGCGTCGCT CGACGGCGTG ACGATCCGTT ATCAGAAAGG CGAAGGGCGC
CTGAAGATCA CGATTGCGCA AGCCGCGCTC GAATTCGCCG ATGCGTCGTA CCTGCCGCCC
GAGCGCTGGA GCGACGGCGT CGACGGCGCG ATGCTCGACT ATCGCGTGCT CGCGAACGCG
AACCACGCGT TCGGCCGCGG CGCGCAGCAG AACAATGCGG TGCAGGCGTA CGGCACGATC
GGCGCGAACT GGGGCGCGTG GCGCTTTCGC GGCGATTATC AGGCGCAGAC TCGCGCGGGC
GGCGCCGTGT ACGCGGAGCG CGCGTTCCGC TTCAACCAGC TGTACGCGTA TCGCGCGCTG
CCGTCGATTC GCTCGACGCT GTCGTTCGGC GAGATCTACG TCGATTCGGA CATCTTCAGC
ACGTTCTCGA TGTCGGGCGT CGCGATGAAG AGCGACGACC GGATGCTGCC GCCTTCGATG
CGCGGCTACG CGCCGCTCGT CACGGGCGTC GCGCGCACCA ACGCGATCGT CAAGGTGATG
CAGGACAGCC GCGTGCTGTA CATGACGAAG GTGTCGCCGG GCGCGTTCGC GCTGTCGAAC
CTGAACACGA GCGTGCAGGG CACGCTCGAC GTCGTCGTCG AGGAGGAGGA CGGCACGGTG
CAGCGCTTCC AGGTCGCGAC CGCGGCGGTG CCGTTTCTCG CGCGCGAGGG CCAACTGCGC
TACAAGACCG CGATCGGCCA GCCGCGCACC TTCGGCGGCG CGGGCATCAC GCCGTGGTTC
GGCTTCGCCG AGGCCGCGTA CGGGCTGCCG TTCGACGTGA CCGTCTACGG CGGCCTCATC
GCGGCGTCCG GCTATACGTC GGTCGCGTTC GGCGTCGGCC GCGATTTCGG CCGCTTCGGC
GCGCTGTCGG CCGACGTGAC GCACGCGCGC GCGACGCTCT GGTGGAGCGG CCGGACGAAG
CGCGGCAACT CGTATCGAAT CAACTATTCG AAGCACGTCG ACGCGCTCGA CGCCGACGTG
CGCTTCTTCG GCTATCGCTT CTCCGAGCGC GACTACACGA ATTTCCAGCA GTTCTCGGGC
GACCCGACCG CGTCGGGCCT CGCGAACGGC AAGCAGCGCT ATTCGGCGAT GCTCTCCAAG
CGCTTCGGCG ATACGTCGAC CTATTTCTCG TACGACCAGA CGACCTACTG GGCGCGCCCG
TCCGATCGGC GCATCGGCGT GACGCTCACG CGCGCGTTCT CGCTCGGCGC GCTGAAGAGC
GTGAACCTGG GTTTCTCCGC GTTCCGCACG CAAGGCGCGG GCGGCGGCGG CAACCAGGTG
TCGCTGACGG CGACGCTGCC GCTCGGCGAG CGCCAGACGC TCACGTCGAG CGTATCGGCG
GGCGAGGGCG GCACGAGCGT GAACGCGGGC TACCTCTACG ATGGCGCGAA CGGGCGCACC
TATCAGCTGT ACGGCGGCAC GACCGACGGC CGCGCGTCGG CGAACGCGAG CTTGCGGCAG
CGCACGCCGT CGTACCAGCT CACCGCGCAG GCGTCGACGG TCGCGAACGC GTACGCGTCG
GCGTCGCTCG AGGTCGACGG CTCGTTCGTC GCGACGCGCT ACGGCGTGAC CGCGCACGCG
AACGGCAACG CGGGCGACAC GCGCCTGCTC GTGTCGACCG ACGGCGTGCC CGGCGTGCCG
CTGTCCGGCT CGTACGCCCG CACGAATGCG CGCGGCTATG CGGTGATCGA CGGCGTGTCG
CCGTACAACG TGTACGACGC GACCGTGAGC GTCGAGAAGC TCGGCCTCGA CACCGACGTG
ACGAACCCGA TTCAGCGCAC CGTGCTCACC GACGGCGCGA TCGGCTACAT CCGGTTCAAC
GCGGCGCGCG GGCGCAACGT GTTCGTCACG CTGACGGGCG ACGGCGGCGC ACCGGTGCCG
TTCGGCGCGT CGGTGCAGGA CGCCGCGACC GGCAAGGAGC TCGGCATCGT CGGCGAGGCG
GGCGCCGCGT ACCTGACGCA GGTGCAGCCG CGCGCGAAGC TCGTCGTGCG CGCCGGCGCG
AAGACGATCT GCACGCCCGC CGCGCTTCCC GACACGCTGC AGCTCGACGG CACGCCCGCG
CCGGTGGCCT GCGAAGCCGC CGCGCAGCAC GCGTCGCGCT GA
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| Protein sequence | MFMLAAGSHA RATEFNASFL SIDGRNDVDL SQFAQADYTL PGTYLLDVQV NDVFFGLQPI
EFVAHDGGQG ARACVAPELV AQFGLKKSLV ENLPRTMGGR CADLASLDGV TIRYQKGEGR
LKITIAQAAL EFADASYLPP ERWSDGVDGA MLDYRVLANA NHAFGRGAQQ NNAVQAYGTI
GANWGAWRFR GDYQAQTRAG GAVYAERAFR FNQLYAYRAL PSIRSTLSFG EIYVDSDIFS
TFSMSGVAMK SDDRMLPPSM RGYAPLVTGV ARTNAIVKVM QDSRVLYMTK VSPGAFALSN
LNTSVQGTLD VVVEEEDGTV QRFQVATAAV PFLAREGQLR YKTAIGQPRT FGGAGITPWF
GFAEAAYGLP FDVTVYGGLI AASGYTSVAF GVGRDFGRFG ALSADVTHAR ATLWWSGRTK
RGNSYRINYS KHVDALDADV RFFGYRFSER DYTNFQQFSG DPTASGLANG KQRYSAMLSK
RFGDTSTYFS YDQTTYWARP SDRRIGVTLT RAFSLGALKS VNLGFSAFRT QGAGGGGNQV
SLTATLPLGE RQTLTSSVSA GEGGTSVNAG YLYDGANGRT YQLYGGTTDG RASANASLRQ
RTPSYQLTAQ ASTVANAYAS ASLEVDGSFV ATRYGVTAHA NGNAGDTRLL VSTDGVPGVP
LSGSYARTNA RGYAVIDGVS PYNVYDATVS VEKLGLDTDV TNPIQRTVLT DGAIGYIRFN
AARGRNVFVT LTGDGGAPVP FGASVQDAAT GKELGIVGEA GAAYLTQVQP RAKLVVRAGA
KTICTPAALP DTLQLDGTPA PVACEAAAQH ASR
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