Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_1408 |
Symbol | |
ID | 4882832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 1377284 |
End bp | 1378384 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640127336 |
Product | ABC transporter, permease protein |
Protein accession | YP_001058451 |
Protein GI | 126442287 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.907459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTCGA CGAGGCGCAG AACGACCGAC GATCGACGCG CGCGCGCCGC CCAAGCGATG TCGCGCCGCG CGGCGCACCT CGCCTGCGCG CTCCCCGTCG CCGCGCGCGG TGCCGTCATC AGTTCTTCAT CGACGCCGCC GATAATCCTC GTCGACGAAA ACGTTTACAT CGCATTGCGC ACGCCCATGA CGCCTCCCTC GAAGGACGCC GCCGCCCTCG CCCGCCCCGC CGTCGCGGCC GGCCCGCACG CGCCCCCCGC CGTCCGCCGC GCACGCCGCG CGCCGCTCGA CTGGCTCGCC GCCGCGCAAT GGGCGGTCAC GCTCGCGCTG TGCGCGTTCC TGATCGTACC CGTCGCGATG TCGGTGCTCG CCGGGCTCAC GGTCAATTAT TTTCGCGGGC CGTCGAGCGG GCTCACGCTG CGCTGGCTCG GCGAGGTGTG GGCCCAATAT CACGGCTCGG TATTCCTGTC GCTCGAAGTC GCGCTCGCGA CGCTCGCCGT CACGCTCGTC GCGGGCGTGC CTGCCGGCTA CGCGCTCGCG CGCAGCCGCA GCCGCGTCTC GCGCCTGATC GAGGAGGCGC TCGTGCTGCC CGTCGCGCTG CCAGGCCTCG CGTCCGCGCT CGCACTGCTG AGCGTCTACG GCGGCTTCGC CGCGTTCCGC ACGAGCCTGT GGTTCATCGT CGTCGGCCAC GTCGTGTTCA CGCTGCCGTT CATGGTCCGC GCGGTCGCGG CCGTCGCCGC GCGCGCCGAT CTGCGCACGC TCGAGGAAGG CGCGGCGAGC CTCGGCGCAT CGTTCGCCAC GCGCTTCGCG ACGATCGTGC TGCCGAACCT GCGCCCGGGC ATCGTCGCCG GCGCGCTCGC GGTGCTCACG CTGTCGATCG GCGAATTCAA CCTCACGTGG ATGCTCCACA CGCCCGACAC GAAGACGCTG CCTGTCGGCC TCGCCGATAC GTACGCGTCA CTGCGCCTCG AAATCGGCAG CGCGTACACG ATCCTGTTCC TGCTGATGAC GCTGCCGCTG CTCGTCGCGA TGCAACGGCT CGGCGTCGAG CCGCCGGGCG CGCGCGATCG CACACGCGAT CGCACGTGCA AGCGCCGCTG A
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Protein sequence | MHSTRRRTTD DRRARAAQAM SRRAAHLACA LPVAARGAVI SSSSTPPIIL VDENVYIALR TPMTPPSKDA AALARPAVAA GPHAPPAVRR ARRAPLDWLA AAQWAVTLAL CAFLIVPVAM SVLAGLTVNY FRGPSSGLTL RWLGEVWAQY HGSVFLSLEV ALATLAVTLV AGVPAGYALA RSRSRVSRLI EEALVLPVAL PGLASALALL SVYGGFAAFR TSLWFIVVGH VVFTLPFMVR AVAAVAARAD LRTLEEGAAS LGASFATRFA TIVLPNLRPG IVAGALAVLT LSIGEFNLTW MLHTPDTKTL PVGLADTYAS LRLEIGSAYT ILFLLMTLPL LVAMQRLGVE PPGARDRTRD RTCKRR
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